Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00014904 |
| length | 864 |
| RNA type | mRNA |
| GC content | 0.57 |
| exon number | 8 |
| gene id | AMCG00014904 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 39381101 ~ 39389687 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0035845 | photoreceptor cell outer segment organization | biological_process |
| GO:0008594 | photoreceptor cell morphogenesis | biological_process |
| GO:0039023 | pronephric duct morphogenesis | biological_process |
| GO:0042995 | cell projection | cellular_component |
| id | description |
|---|---|
| K19685 | TTC26, IFT56, DYF13; intraflagellar transport protein 56 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU92804 | lncRNA | upstream | 75127 | 39305580 ~ 39305974 (+) | True | G74338 |
| TU92799 | lncRNA | upstream | 95297 | 39285294 ~ 39285804 (+) | True | G74333 |
| TU92796 | lncRNA | upstream | 101133 | 39279236 ~ 39279968 (+) | True | G74330 |
| TU92795 | lncRNA | upstream | 104263 | 39276240 ~ 39276838 (+) | True | G74329 |
| TU92770 | lncRNA | upstream | 198467 | 39182279 ~ 39182634 (+) | True | G74306 |
| TU92830 | lncRNA | downstream | 87129 | 39476816 ~ 39481707 (+) | True | G74363 |
| TU92905 | lncRNA | downstream | 109016 | 39498703 ~ 39499660 (+) | True | G74422 |
| TU92928 | lncRNA | downstream | 195235 | 39584922 ~ 39585159 (+) | True | G74442 |
| TU92921 | lncRNA | downstream | 197726 | 39587413 ~ 39588507 (+) | True | AMCG00014909 |
| TU92947 | lncRNA | downstream | 212165 | 39601852 ~ 39602098 (+) | True | G74459 |
| AMCG00014900 | mRNA | upstream | 120824 | 39237624 ~ 39260277 (+) | True | AMCG00014900 |
| AMCG00014899 | mRNA | upstream | 148096 | 39227927 ~ 39233005 (+) | True | AMCG00014899 |
| AMCG00014898 | mRNA | upstream | 413079 | 38961953 ~ 38968022 (+) | True | AMCG00014898 |
| AMCG00014896 | mRNA | upstream | 596929 | 38783395 ~ 38784172 (+) | True | AMCG00014896 |
| AMCG00014893 | mRNA | upstream | 734159 | 38643054 ~ 38646942 (+) | True | AMCG00014893 |
| AMCG00014908 | mRNA | downstream | 122085 | 39511772 ~ 39529811 (+) | True | AMCG00014908 |
| AMCG00014907 | mRNA | downstream | 176046 | 39565733 ~ 39575588 (+) | True | AMCG00014907 |
| AMCG00014909 | mRNA | downstream | 194351 | 39584038 ~ 39588279 (+) | False | AMCG00014909 |
| AMCG00014913 | mRNA | downstream | 229121 | 39618808 ~ 39621018 (+) | False | AMCG00014913 |
| AMCG00014912 | mRNA | downstream | 233739 | 39623426 ~ 39626200 (+) | True | AMCG00014912 |
| TU92678 | other | upstream | 569973 | 38810693 ~ 38811128 (+) | True | G74227 |
| TU92541 | other | upstream | 948240 | 38432374 ~ 38432861 (+) | True | G74114 |
| TU92227 | other | upstream | 1862695 | 37518108 ~ 37518406 (+) | True | G73850 |
| TU91690 | other | upstream | 3986452 | 35390634 ~ 35394649 (+) | False | AMCG00014836 |
| TU91622 | other | upstream | 4420654 | 34942011 ~ 34960447 (+) | True | G73343 |
| TU92948 | other | downstream | 217200 | 39606887 ~ 39621186 (+) | True | AMCG00014913 |
| TU93044 | other | downstream | 475395 | 39865082 ~ 39872003 (+) | False | AMCG00014923 |
| TU93045 | other | downstream | 475933 | 39865620 ~ 39872003 (+) | False | AMCG00014923 |
| TU93040 | other | downstream | 483453 | 39873140 ~ 39875428 (+) | True | AMCG00014923 |
| TU93074 | other | downstream | 561501 | 39951188 ~ 39953257 (+) | False | AMCG00014925 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00063446 | False | 2427 | mRNA | 0.45 | 17 | NC_007117.7 | 7688491 ~ 7711349 (-) |
