RNA id: AMCG00014909



Basic Information


Item Value
RNA id AMCG00014909
length 294
RNA type mRNA
GC content 0.59
exon number 4
gene id AMCG00014909
representative False

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 39584038 ~ 39588507 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGACACGAGCATTCGAATGTCACTACCAGCTTTCCACAGGGTCCAAACTGAACATCCTGCAGGAGGGAGAGTCCACCAGCCTGGTGACGCTGCGGGGCGAGGTCACTCAGATTATTCAGATGCTGCGGGAGTACCTGAGCCGTGTGGGGCAGCAGGAGCAGAGGGACAGACTGGAGCAGATCTGCACACAGCTGCAGCACACCAGCACCAAGGCTCAGgtggaTGAGGTGACAGATCTGCTGGCCAGCTTCACCTCCCTGAGTCTACAGATGCACGGCCTGGGGGAGAGGTAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92905 lncRNA upstream 84378 39498703 ~ 39499660 (+) True G74422
TU92830 lncRNA upstream 102331 39476816 ~ 39481707 (+) True G74363
TU92804 lncRNA upstream 278064 39305580 ~ 39305974 (+) True G74338
TU92799 lncRNA upstream 298234 39285294 ~ 39285804 (+) True G74333
TU92796 lncRNA upstream 304070 39279236 ~ 39279968 (+) True G74330
TU92947 lncRNA downstream 13573 39601852 ~ 39602098 (+) True G74459
TU92983 lncRNA downstream 59550 39647829 ~ 39659512 (+) True G74484
TU92997 lncRNA downstream 71254 39659533 ~ 39659958 (+) True G74491
TU92991 lncRNA downstream 93976 39682255 ~ 39722288 (+) False G74486
TU92992 lncRNA downstream 106883 39695162 ~ 39722288 (+) True G74486
AMCG00014907 mRNA upstream 8450 39565733 ~ 39575588 (+) True AMCG00014907
AMCG00014908 mRNA upstream 54227 39511772 ~ 39529811 (+) True AMCG00014908
AMCG00014904 mRNA upstream 194351 39381101 ~ 39389687 (+) True AMCG00014904
AMCG00014900 mRNA upstream 323761 39237624 ~ 39260277 (+) True AMCG00014900
AMCG00014899 mRNA upstream 351033 39227927 ~ 39233005 (+) True AMCG00014899
AMCG00014913 mRNA downstream 30529 39618808 ~ 39621018 (+) False AMCG00014913
AMCG00014912 mRNA downstream 35147 39623426 ~ 39626200 (+) True AMCG00014912
AMCG00014911 mRNA downstream 42411 39630690 ~ 39636561 (+) True AMCG00014911
AMCG00014919 mRNA downstream 118782 39707061 ~ 39707433 (+) True AMCG00014919
AMCG00014918 mRNA downstream 119255 39707534 ~ 39707752 (+) True AMCG00014918
TU92814 other upstream 108219 39336268 ~ 39475819 (+) True G74348
TU92678 other upstream 772910 38810693 ~ 38811128 (+) True G74227
TU92541 other upstream 1151177 38432374 ~ 38432861 (+) True G74114
TU92227 other upstream 2065632 37518108 ~ 37518406 (+) True G73850
TU91690 other upstream 4189389 35390634 ~ 35394649 (+) False AMCG00014836
TU92948 other downstream 18608 39606887 ~ 39621186 (+) True AMCG00014913
TU93044 other downstream 276803 39865082 ~ 39872003 (+) False AMCG00014923
TU93045 other downstream 277341 39865620 ~ 39872003 (+) False AMCG00014923
TU93040 other downstream 284861 39873140 ~ 39875428 (+) True AMCG00014923
TU93074 other downstream 362909 39951188 ~ 39953257 (+) False AMCG00014925

Expression Profile