RNA id: AMCG00014913


Basic Information

Item Value
RNA id AMCG00014913
length 391
RNA type mRNA
GC content 0.66
exon number 3
gene id AMCG00014913
representative False

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 39606887 ~ 39621186 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TGTGGACCTGTCGGAGCTGATCAAGGGAGCGACCCGCCAGGCTCACGAGCGCGCAGAGAACACAGCGCTGATGCTGCGCTTCCAGAAGGGCCAGATCACCCTGCCCGAGCACAAGTTGCTGCTGTGCTGTCTGTACACTGTGTACacagccctggaggaggagctAGATCGGAACGCGTCCCACCCCTCTGTGGCTCCAGTCCACTTCCCAGCCGAGCTGAGCCGGGTCGCCGCCCTGGAGGCTGACCTGCAGTACCACCTGGGCCCGGGCTGGAGAGAGCGGGTGCTGGGCAAGATGGCCCAGAAGGCCCTGGGGCTGCCGGGCGGTGAGGGGGCGGGGCTGGATTTCTTCTCGTTTCCGGGGGTTACCAACGCCACACGCTTCAAGCAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU92947 lncRNA upstream 16710 39601852 ~ 39602098 (+) True G74459
TU92921 lncRNA upstream 30301 39587413 ~ 39588507 (+) True AMCG00014909
TU92928 lncRNA upstream 33649 39584922 ~ 39585159 (+) True G74442
TU92905 lncRNA upstream 119148 39498703 ~ 39499660 (+) True G74422
TU92830 lncRNA upstream 137101 39476816 ~ 39481707 (+) True G74363
TU92983 lncRNA downstream 26811 39647829 ~ 39659512 (+) True G74484
TU92997 lncRNA downstream 38515 39659533 ~ 39659958 (+) True G74491
TU92991 lncRNA downstream 61237 39682255 ~ 39722288 (+) False G74486
TU92992 lncRNA downstream 74144 39695162 ~ 39722288 (+) True G74486
TU93013 lncRNA downstream 105448 39726466 ~ 39734537 (+) True G74505
AMCG00014909 mRNA upstream 30529 39584038 ~ 39588279 (+) False AMCG00014909
AMCG00014907 mRNA upstream 43220 39565733 ~ 39575588 (+) True AMCG00014907
AMCG00014908 mRNA upstream 88997 39511772 ~ 39529811 (+) True AMCG00014908
AMCG00014904 mRNA upstream 229121 39381101 ~ 39389687 (+) True AMCG00014904
AMCG00014900 mRNA upstream 358531 39237624 ~ 39260277 (+) True AMCG00014900
AMCG00014912 mRNA downstream 2408 39623426 ~ 39626200 (+) True AMCG00014912
AMCG00014911 mRNA downstream 9672 39630690 ~ 39636561 (+) True AMCG00014911
AMCG00014919 mRNA downstream 86043 39707061 ~ 39707433 (+) True AMCG00014919
AMCG00014918 mRNA downstream 86516 39707534 ~ 39707752 (+) True AMCG00014918
AMCG00014922 mRNA downstream 211450 39832468 ~ 39846425 (+) True AMCG00014922
TU92814 other upstream 142989 39336268 ~ 39475819 (+) True G74348
TU92678 other upstream 807680 38810693 ~ 38811128 (+) True G74227
TU92541 other upstream 1185947 38432374 ~ 38432861 (+) True G74114
TU92227 other upstream 2100402 37518108 ~ 37518406 (+) True G73850
TU91690 other upstream 4224159 35390634 ~ 35394649 (+) False AMCG00014836
TU93044 other downstream 244064 39865082 ~ 39872003 (+) False AMCG00014923
TU93045 other downstream 244602 39865620 ~ 39872003 (+) False AMCG00014923
TU93040 other downstream 252122 39873140 ~ 39875428 (+) True AMCG00014923
TU93074 other downstream 330170 39951188 ~ 39953257 (+) False AMCG00014925
TU93084 other downstream 342750 39963768 ~ 39972411 (+) True AMCG00014928