RNA id: AMCG00014918


Basic Information

Item Value
RNA id AMCG00014918
length 219
RNA type mRNA
GC content 0.53
exon number 1
gene id AMCG00014918
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 39707534 ~ 39707752 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGAAGAGGAGATGACCAGGCAACTAGCCATGGCTCTGGATGACAAAGCCCGACAAGCGCTCCCAGATGTACCAGAGGAAGAGCAACGAGATTACCAAGCCTTAGTCGCAACACTGCAGCAGGTTTTCAGTGACAGAGAACTAACCAGCACCTGGTTAGAGAAATTGACTGCACTGAGGAGGAAGCCCAGAGAGAAGATGGGGCCCCCTTGCAGCTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU92997 lncRNA upstream 47576 39659533 ~ 39659958 (+) True G74491
TU92983 lncRNA upstream 48022 39647829 ~ 39659512 (+) True G74484
TU92947 lncRNA upstream 105436 39601852 ~ 39602098 (+) True G74459
TU92921 lncRNA upstream 119027 39587413 ~ 39588507 (+) True AMCG00014909
TU92928 lncRNA upstream 122375 39584922 ~ 39585159 (+) True G74442
TU93013 lncRNA downstream 18714 39726466 ~ 39734537 (+) True G74505
TU93014 lncRNA downstream 25971 39733723 ~ 39734537 (+) False G74505
TU93020 lncRNA downstream 36373 39744125 ~ 39744360 (+) True G74511
TU93022 lncRNA downstream 44445 39752197 ~ 39752551 (+) True G74513
TU93025 lncRNA downstream 47638 39755390 ~ 39755664 (+) True G74516
AMCG00014919 mRNA upstream 101 39707061 ~ 39707433 (+) True AMCG00014919
AMCG00014911 mRNA upstream 70973 39630690 ~ 39636561 (+) True AMCG00014911
AMCG00014912 mRNA upstream 81334 39623426 ~ 39626200 (+) True AMCG00014912
AMCG00014913 mRNA upstream 86516 39618808 ~ 39621018 (+) False AMCG00014913
AMCG00014909 mRNA upstream 119255 39584038 ~ 39588279 (+) False AMCG00014909
AMCG00014922 mRNA downstream 124716 39832468 ~ 39846425 (+) True AMCG00014922
AMCG00014923 mRNA downstream 163683 39871435 ~ 39875105 (+) False AMCG00014923
AMCG00014921 mRNA downstream 168448 39876200 ~ 39887566 (+) True AMCG00014921
AMCG00014926 mRNA downstream 180348 39888100 ~ 39899640 (+) True AMCG00014926
AMCG00014925 mRNA downstream 243437 39951189 ~ 39953278 (+) True AMCG00014925
TU92948 other upstream 86348 39606887 ~ 39621186 (+) True AMCG00014913
TU92814 other upstream 231715 39336268 ~ 39475819 (+) True G74348
TU92678 other upstream 896406 38810693 ~ 38811128 (+) True G74227
TU92541 other upstream 1274673 38432374 ~ 38432861 (+) True G74114
TU92227 other upstream 2189128 37518108 ~ 37518406 (+) True G73850
TU93044 other downstream 157330 39865082 ~ 39872003 (+) False AMCG00014923
TU93045 other downstream 157868 39865620 ~ 39872003 (+) False AMCG00014923
TU93040 other downstream 165388 39873140 ~ 39875428 (+) True AMCG00014923
TU93074 other downstream 243436 39951188 ~ 39953257 (+) False AMCG00014925
TU93084 other downstream 256016 39963768 ~ 39972411 (+) True AMCG00014928