RNA id: AMCG00014924


Basic Information

Item Value
RNA id AMCG00014924
length 1527
RNA type mRNA
GC content 0.67
exon number 1
gene id AMCG00014924
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 39820563 ~ 39822089 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGCTGGAGCTCCCTGCCTGTGTTTCAGAGCTGCGCCCCGTGGGAGACAGACAGCAGGACAGGACCAGAAAACCACGCAAGAGAAGAGAGGCATGGcccgctcctcctcctccctccttctcccactcctcctcctcctcctcctctccctgccCCTCTACAGCCCAGCAATACCCAGCCCCCCAAACAGCACCAGCCTGGAATCCGCTCCTGCAAACACCACAGACGCCATCACATCAAAAAACAACGCCAACCCAACGCCACCCACCGCCAACATGACCTCGACCAACACCGCCTCAACCCAACGCCTTGCCAACGGAATGCCAACCAACGCCACCCGTGCCCGCGGCTGTGGGGAAGGCCTGGCCCCCGTCTACTCATACCTGTGCGACCTGGATGCGGTCTGGGGCGTGGTTGTGGAGGCACTGGCCTCCCTGGGCTTCCTGTTGGCAGTAGGGCTGGCCCTGGGGCTGGTGGGGTGGGTGGCGTGCGGCCTGTGTGCGCGCCGGACTGGTAGTGGGCGCTGGGGTCACTGGGGTGGCAGGGGTTGCCCCGCGGGGGGCGAGGTGGCCCTGCTGCTGTTCTTGCTCCTGGGCTGCGCCGGGCTCTTCGCTCTGGTCtttgccttcgtcatccagtcAGACGCCCGCACCTGCCCCACCAGGGTCTTCCTCTTCGGTGTGCTCTTCGCTCAGGTCTTCTCGTCCCTGCTGGCCCTGGCCCTCTGGCTGCCTGGACCGAGGGGCTGCAGTGGCCGGGGCGGGGCCTGGGGGGCCCTGGGGCTGGCGGTGGCACTCACCCTGGTACAGGTGGTCATCGCGGTGGAGTGGCTGGTCCTCGTGCTGGTGCGCGATGGCCTACCCTGCTACTACAGCCAGGccgaattcatcctgctgcagGTCTACGTGCTTGTGCTGCTGGCCACTGCGCTGGGGGCGTCTCTGCTCCGAGTGGGCTGCCTGTTCTACCGTCACAGCTACGGGTACGACTCCAGCGCCGGCTCAGTGTGGGCGCGGGTCCAATCGGGCCTGCTGTGcctggtgctggtgctgtgcGTTGGGGTGTGGGTGGTGTGGATCACCCTGCTGACCCGTGGGAACCCAGAGATGGGCCGCCGCCCCCGCTGGGACGACCCGGTCCTGAGCGTGGCGCTGCTGACCTGCGCTGCCTGTGTCCTGCTGGGCGCCGCCCTGCCCCAGTTCCTCCACCTCCTCGGTCTCGGGGGGGGCGAGGCTGGAGGGGCCAAGGGCAAGGGGGGTCCTCCGGATTTCCGAGGATGGACCAGCCCCACCACCCTGACCGGCCTGGGAAGTGAGAGGGCGGGCCGGGAGAACAGCAGCTACGTCAGCAGCGAGGGAGCGGGGGAAGAGCCggtggaggagaagaagaagaagaagagaggtaagagcaggaggaggagaggacgAGGTAGAGAGGAGggtgaggaggaagagaggaggaggtggaaaggtgggggagaggaagaagaagatagctggggagaggaggaggagagggagaggtag

Function

GO:

id name namespace
GO:0060841 venous blood vessel development biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU93024 lncRNA downstream 66625 39753695 ~ 39753938 (-) True G74515
TU93021 lncRNA downstream 76204 39744128 ~ 39744359 (-) True G74512
TU93019 lncRNA downstream 84162 39736044 ~ 39736401 (-) True G74510
TU93009 lncRNA downstream 117969 39699563 ~ 39702594 (-) True G74501
TU92961 lncRNA downstream 195770 39623354 ~ 39624793 (-) True G74469
TU93159 lncRNA upstream 140841 39962930 ~ 40005067 (-) False G74597
TU93158 lncRNA upstream 165413 39987502 ~ 40005067 (-) True G74597
TU93149 lncRNA upstream 188980 40011069 ~ 40012081 (-) False G74593
TU93150 lncRNA upstream 188980 40011069 ~ 40012081 (-) False G74593
TU93153 lncRNA upstream 188980 40011069 ~ 40012081 (-) False G74593
AMCG00014920 mRNA downstream 55923 39762570 ~ 39764640 (-) True AMCG00014920
AMCG00014916 mRNA downstream 163001 39648804 ~ 39657562 (-) True AMCG00014916
AMCG00014917 mRNA downstream 179307 39640411 ~ 39641256 (-) True AMCG00014917
AMCG00014915 mRNA downstream 221067 39592614 ~ 39599496 (-) True AMCG00014915
AMCG00014914 mRNA downstream 228905 39590558 ~ 39591658 (-) True AMCG00014914
AMCG00014927 mRNA upstream 136736 39958825 ~ 39960996 (-) True AMCG00014927
AMCG00014930 mRNA upstream 207683 40029772 ~ 40039325 (-) True AMCG00014930
AMCG00014935 mRNA upstream 263687 40085776 ~ 40107665 (-) True AMCG00014935
AMCG00014933 mRNA upstream 331330 40153419 ~ 40160349 (-) True AMCG00014933
AMCG00014934 mRNA upstream 340297 40162386 ~ 40164580 (-) True AMCG00014934
TU92969 other downstream 181606 39637899 ~ 39638957 (-) True G74477
TU92854 other downstream 560203 39258062 ~ 39260360 (-) True G74375
TU92703 other downstream 900210 38898095 ~ 38920353 (-) True G74247
TU92596 other downstream 1176025 38597368 ~ 38644538 (-) False G74160
TU92559 other downstream 1329623 38490323 ~ 38490940 (-) False AMCG00014891
TU93111 other upstream 79381 39901470 ~ 39983396 (-) True G74569
TU93148 other upstream 112804 39934893 ~ 40012081 (-) True G74593
TU93146 other upstream 122641 39944730 ~ 39951070 (-) True G74591
TU93152 other upstream 162605 39984694 ~ 40012081 (-) False G74593
TU93302 other upstream 414313 40236402 ~ 40236795 (-) False AMCG00014938

Expression Profile