RNA id: AMCG00014928



Basic Information


Item Value
RNA id AMCG00014928
length 396
RNA type mRNA
GC content 0.58
exon number 5
gene id AMCG00014928
representative False

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 39963768 ~ 39973070 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGAGTCACTGTGAGACACACCCAGCCCAGCAGCACCCAGACTCATCGGGCAGTTCGGAGGGTCTGGTGGCACCCCCCACCTTCCCCACAtttcctcccccacccccctctcagAATGGCTTGTCCTCAGAATTTGGGGGGCCACAGGGGGGGTTGCCACTGTACGGGGCAGGGGCAGTAGGCGGGGGCAGCGAGTCCCCCGACTCCAAGAGCACACCCAAGAGACTCCATGTGTCCAACATCCCCTTCCGCTTCAGGGATCCAGACCTCAGGCAGATGTTTGGGCAATTTGGGAAGATCTTGGATGTGGAGATAATCTTCAATGAGAGAGGGTCAAAGagtgagagagagagaggggggtgtgTGAGAGTAGGAGAGATGGACAGATGGAGATAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU93030 lncRNA upstream 129645 39796112 ~ 39840618 (+) True G74521
TU93025 lncRNA upstream 214599 39755390 ~ 39755664 (+) True G74516
TU93022 lncRNA upstream 217712 39752197 ~ 39752551 (+) True G74513
TU93020 lncRNA upstream 225903 39744125 ~ 39744360 (+) True G74511
TU93014 lncRNA upstream 235726 39733723 ~ 39734537 (+) False G74505
TU93093 lncRNA downstream 14432 39987502 ~ 40006654 (+) True G74557
TU93177 lncRNA downstream 128823 40101893 ~ 40138259 (+) True G74615
TU93222 lncRNA downstream 258547 40231617 ~ 40231881 (+) True G74647
TU93224 lncRNA downstream 259704 40232774 ~ 40233420 (+) True G74649
TU93234 lncRNA downstream 311831 40284901 ~ 40286138 (+) True G74656
AMCG00014925 mRNA upstream 16985 39951189 ~ 39953278 (+) True AMCG00014925
AMCG00014926 mRNA upstream 70623 39888100 ~ 39899640 (+) True AMCG00014926
AMCG00014921 mRNA upstream 82697 39876200 ~ 39887566 (+) True AMCG00014921
AMCG00014923 mRNA upstream 95158 39871435 ~ 39875105 (+) False AMCG00014923
AMCG00014922 mRNA upstream 123838 39832468 ~ 39846425 (+) True AMCG00014922
AMCG00014929 mRNA downstream 12235 39985305 ~ 39990486 (+) True AMCG00014929
AMCG00014931 mRNA downstream 141058 40114128 ~ 40140409 (+) True AMCG00014931
AMCG00014932 mRNA downstream 174353 40147423 ~ 40151507 (+) True AMCG00014932
AMCG00014936 mRNA downstream 215639 40188709 ~ 40206799 (+) True AMCG00014936
AMCG00014939 mRNA downstream 237758 40210828 ~ 40211397 (+) True AMCG00014939
TU93074 other upstream 17006 39951188 ~ 39953257 (+) False AMCG00014925
TU93040 other upstream 94835 39873140 ~ 39875428 (+) True AMCG00014923
TU93044 other upstream 98260 39865082 ~ 39872003 (+) False AMCG00014923
TU93045 other upstream 98260 39865620 ~ 39872003 (+) False AMCG00014923
TU92948 other upstream 349077 39606887 ~ 39621186 (+) True AMCG00014913
TU93214 other downstream 186831 40159901 ~ 40160578 (+) True G74642
TU93215 other downstream 188946 40162016 ~ 40163997 (+) True G74643
TU93243 other downstream 358917 40331987 ~ 40373863 (+) False AMCG00014942
TU93250 other downstream 365145 40338215 ~ 40340395 (+) False AMCG00014940
TU93241 other downstream 396067 40369137 ~ 40373863 (+) True AMCG00014942

Expression Profile