RNA id: AMCG00014934


Basic Information

Item Value
RNA id AMCG00014934
length 1427
RNA type mRNA
GC content 0.49
exon number 2
gene id AMCG00014934
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 40162386 ~ 40164580 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gtttatacagtgtgcgtgcgtgtgtgtgtgtacagtgtgtctgtgtatgtacagtgtgtgtgtgtatgtactgtgtatgtacagtgtgtgGTTCCAGTTTTTGACTCGGACTCCACTTCGGGTTTCTGCATGCTCTTCCCACAGGGCTGCCAGGGCGCCGCTCGAGACAGCTGCGACTGGTTTAAACCGGATCAAACCAGACAGCTCTGCCAGGGGGCGAGATGCCATTCACACAGCACGCCATCACCACAAACACCGCCTCAACACCTATCAACATCAATAATGGGAATAAACCTGAATACGAAACTTTAAATTACAAGTATTTTAACTTACCACTGTAACGTTAGCCACTATTAACAATTAagacaatgataataatatccTAATAACAGTTGTAGTACCAGCAATATTTAGAGAGCTGTTAATACACAATCCCTAAAAAGTATATTTCTCACACTTTAATTCTATTACTGTCTTTACTAACAGTATTGCTGTCAACACTTTTTTTATAGGGGTGTGATTTACAACAAAAACGACAAGAACCAGCACTGCGACTCATTACCCCCCACCTGTGGGCTCACGGCGGTACTGCAGCTCCGGCCTCTGGCGCCGTTCTGCAGGGCAGCGTCTCCCTCTGGCGGCGGCGCGGCGAACTGCACCCGCTGGCAGGGACAACAGGGCCGCATCAGGGGGGCACTGCGCATGCGCCAGCGCTCACCGCACCCGCAGAGCCAAAGCAATTAGTATCCTAATAGTAGCGAAAAACGATTTATTTCGTTCATTTCCCTTCGGATTCGTTCTGTTATTATTGcaattgctgttgttgttacaATCATTtgcatcattataattattgttgtggTAACCGATTGGGATTTGCATTGAAGCTggtgtacatgtgtatttcaGGTAACACAAAACGTTGAAAATAATTCACGTTTTAAACACAGAGGGAGATGAAGCCGTGAAAAAAGTGCCCCgaaggaaagagaaacagaaaaacgATTGAAACTATTCAGCTGCTTCCTTTTTTCCGTCCCTATCGAGGATCGCGCTCCGCTTCTCCGCGATCGATTGCTCACACCTGGGTGTCTCCGGCTCTAGAAAATATTCGCCGCCGCGTCAATTGATTGCTCGGAAATCGACTCCTCTGCTCATTTTGTTCGCTTGCTCGATCTCCTCGACGCTCGACTTCTTCGCTCTCTTTAGAAACCAGATCCAAAATGGCGTCTTTAGCTCCTCCGCTGCGGGTCTGCCGAGGAATCCTGAAGGAGATCCGGGCGCTCAAAGGCCCGGACTACCAGCGCTCCCCCGCCTACAGTTATGTCCTGGAGCAGTTCCGGAAGAACCAGGACGCGGGGGACACGGCCGCCATGCTGGGCTTCAGGCTCCCGGCCCAGCCCGGGGGCAAGGGATGGGAGgagtga

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU93190 lncRNA downstream 23285 40101893 ~ 40139101 (-) True G74625
TU93199 lncRNA downstream 33020 40128921 ~ 40129366 (-) True G74633
TU93173 lncRNA downstream 119096 40043007 ~ 40043290 (-) True G74611
TU93149 lncRNA downstream 150305 40011069 ~ 40012081 (-) False G74593
TU93315 lncRNA upstream 132281 40296861 ~ 40299179 (-) True G74725
TU93327 lncRNA upstream 173484 40338064 ~ 40340395 (-) True G74736
TU93328 lncRNA upstream 173484 40338064 ~ 40360225 (-) False G74736
TU93330 lncRNA upstream 201380 40365960 ~ 40368045 (-) True G74738
TU93465 lncRNA upstream 270860 40435440 ~ 40435670 (-) True G74845
AMCG00014933 mRNA downstream 2037 40153419 ~ 40160349 (-) True AMCG00014933
AMCG00014935 mRNA downstream 54721 40085776 ~ 40107665 (-) True AMCG00014935
AMCG00014930 mRNA downstream 123061 40029772 ~ 40039325 (-) True AMCG00014930
AMCG00014927 mRNA downstream 201390 39958825 ~ 39960996 (-) True AMCG00014927
AMCG00014924 mRNA downstream 340297 39820563 ~ 39822089 (-) True AMCG00014924
AMCG00014938 mRNA upstream 70478 40235058 ~ 40268485 (-) True AMCG00014938
AMCG00014946 mRNA upstream 116614 40281194 ~ 40292569 (-) True AMCG00014946
AMCG00014945 mRNA upstream 144307 40308887 ~ 40315938 (-) True AMCG00014945
AMCG00014944 mRNA upstream 183642 40348222 ~ 40359702 (-) True AMCG00014944
AMCG00014952 mRNA upstream 229923 40394503 ~ 40398556 (-) True AMCG00014952
TU93148 other downstream 150305 39934893 ~ 40012081 (-) True G74593
TU93152 other downstream 150305 39984694 ~ 40012081 (-) False G74593
TU93111 other downstream 178990 39901470 ~ 39983396 (-) True G74569
TU93146 other downstream 211316 39944730 ~ 39951070 (-) True G74591
TU92969 other downstream 523429 39637899 ~ 39638957 (-) True G74477
TU93302 other upstream 71822 40236402 ~ 40236795 (-) False AMCG00014938
TU93314 other upstream 127576 40292156 ~ 40294526 (-) False AMCG00014946
TU93316 other upstream 138651 40303231 ~ 40304085 (-) True G74726
TU93349 other upstream 237203 40401783 ~ 40405328 (-) False AMCG00014951
TU93466 other upstream 272759 40437339 ~ 40534709 (-) False AMCG00014949

Expression Profile