RNA id: TU93302


Basic Information

Item Value
RNA id TU93302
length 394
RNA type TUCP
GC content 0.66
exon number 1
gene id AMCG00014938
representative False

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 40235058 ~ 40268485 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

aCGACGGCAACATCCGCTCAGACGTGTCGGATATCTCCACGCACACAGTCACCTACGGCAACCTGGAGGGCAACGCCAAGCGGCGCAAGCAGTACCGCGACTCGCTGAAGAAGCGGCCGGCCTCAGCCAAGAGCCGCCGCGAGCTGGACGAGATCGAGCTGGGCATGAGACGCCGGCCACACTCCTCCCACACGCACCACAGCCACGCCCACTCCCACAGCCACGCACACATGCGCTCCGTCTCCCCGCCACTGCTGCCcctggagaggaagagaggcgggggcgggggcggggcgTCCTATTTCGTGCGGGATAAGGAGGGCCTGAGGGATTTTTACCTGGATCAGTTCCGGCCCAAGGAGGGGGTGCCCCAGTGGGAGCACGTGGATTTGAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU93190 lncRNA downstream 97301 40101893 ~ 40139101 (-) True G74625
TU93199 lncRNA downstream 107036 40128921 ~ 40129366 (-) True G74633
TU93173 lncRNA downstream 193112 40043007 ~ 40043290 (-) True G74611
TU93149 lncRNA downstream 224321 40011069 ~ 40012081 (-) False G74593
TU93150 lncRNA downstream 224321 40011069 ~ 40012081 (-) False G74593
TU93315 lncRNA upstream 60066 40296861 ~ 40299179 (-) True G74725
TU93327 lncRNA upstream 101269 40338064 ~ 40340395 (-) True G74736
TU93328 lncRNA upstream 101269 40338064 ~ 40360225 (-) False G74736
TU93330 lncRNA upstream 129165 40365960 ~ 40368045 (-) True G74738
TU93465 lncRNA upstream 198645 40435440 ~ 40435670 (-) True G74845
AMCG00014934 mRNA downstream 71822 40162386 ~ 40164580 (-) True AMCG00014934
AMCG00014933 mRNA downstream 76053 40153419 ~ 40160349 (-) True AMCG00014933
AMCG00014935 mRNA downstream 128737 40085776 ~ 40107665 (-) True AMCG00014935
AMCG00014930 mRNA downstream 197077 40029772 ~ 40039325 (-) True AMCG00014930
AMCG00014927 mRNA downstream 275406 39958825 ~ 39960996 (-) True AMCG00014927
AMCG00014946 mRNA upstream 44399 40281194 ~ 40292569 (-) True AMCG00014946
AMCG00014945 mRNA upstream 72092 40308887 ~ 40315938 (-) True AMCG00014945
AMCG00014944 mRNA upstream 111427 40348222 ~ 40359702 (-) True AMCG00014944
AMCG00014952 mRNA upstream 157708 40394503 ~ 40398556 (-) True AMCG00014952
AMCG00014951 mRNA upstream 165971 40402766 ~ 40410777 (-) True AMCG00014951
TU93148 other downstream 224321 39934893 ~ 40012081 (-) True G74593
TU93152 other downstream 224321 39984694 ~ 40012081 (-) False G74593
TU93111 other downstream 253006 39901470 ~ 39983396 (-) True G74569
TU93146 other downstream 285332 39944730 ~ 39951070 (-) True G74591
TU92969 other downstream 597445 39637899 ~ 39638957 (-) True G74477
TU93314 other upstream 55361 40292156 ~ 40294526 (-) False AMCG00014946
TU93316 other upstream 66436 40303231 ~ 40304085 (-) True G74726
TU93349 other upstream 164988 40401783 ~ 40405328 (-) False AMCG00014951
TU93466 other upstream 200544 40437339 ~ 40534709 (-) False AMCG00014949
TU93483 other upstream 461058 40697853 ~ 40698276 (-) True G74862

Expression Profile