RNA id: TU93251



Basic Information


Item Value
RNA id TU93251
length 403
lncRNA type read_through
GC content 0.50
exon number 4
gene id AMCG00014940
representative False

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 40338215 ~ 40404638 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ggcgGGTCGCTGGCTCTATCTTGCTGGcggagacgcacacagacagacgcgGACAGACGGGCAGCGCGTAGTGTTTCGTGGtGGCACCATGTTGGTCCTTCTTGCTGGAATCTTCCTCCTTCACATCCTCGTCATCGTCCTGCTGCTCATCGCCACCATTGACAATgccTGGTGGTTCACAGAGACCATGAGCACAGACTTGTGGAACCGCTGTGTGCTGGTGAATGGAGCTTGCAACTACACAGGCCTCCCCCCCAACTATCCCCAGGtgcacctccacttctaattTTACTTCCCCTTTAAAGTGTTTACAGTCAATAGTGTCACCATATGGATTCaggtttacaaaaatgtaaatggttgATTATTGAATGTTACTCTCACTTCAGTCTGATTGTAGAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU93234 lncRNA upstream 52077 40284901 ~ 40286138 (+) True G74656
TU93224 lncRNA upstream 104795 40232774 ~ 40233420 (+) True G74649
TU93222 lncRNA upstream 106334 40231617 ~ 40231881 (+) True G74647
TU93177 lncRNA upstream 199956 40101893 ~ 40138259 (+) True G74615
TU93093 lncRNA upstream 331561 39987502 ~ 40006654 (+) True G74557
TU93276 lncRNA downstream 6243 40410881 ~ 40413637 (+) True G74690
TU93372 lncRNA downstream 84563 40489201 ~ 40491346 (+) True G74768
TU93374 lncRNA downstream 125076 40529714 ~ 40530310 (+) True G74769
TU93383 lncRNA downstream 241543 40646181 ~ 40646393 (+) True G74778
TU93387 lncRNA downstream 296781 40701419 ~ 40701849 (+) True G74782
AMCG00014943 mRNA upstream 7290 40324822 ~ 40330925 (+) True AMCG00014943
AMCG00014937 mRNA upstream 114212 40220472 ~ 40224003 (+) True AMCG00014937
AMCG00014939 mRNA upstream 126818 40210828 ~ 40211397 (+) True AMCG00014939
AMCG00014936 mRNA upstream 131416 40188709 ~ 40206799 (+) True AMCG00014936
AMCG00014932 mRNA upstream 186708 40147423 ~ 40151507 (+) True AMCG00014932
AMCG00014948 mRNA downstream 14936 40419574 ~ 40437283 (+) True AMCG00014948
AMCG00014954 mRNA downstream 125754 40530392 ~ 40532273 (+) True AMCG00014954
AMCG00014956 mRNA downstream 323164 40727802 ~ 40729957 (+) True AMCG00014956
AMCG00014955 mRNA downstream 341058 40745696 ~ 40759910 (+) True AMCG00014955
AMCG00014961 mRNA downstream 611230 41015868 ~ 41035772 (+) True AMCG00014961
TU93215 other upstream 174218 40162016 ~ 40163997 (+) True G74643
TU93214 other upstream 177637 40159901 ~ 40160578 (+) True G74642
TU93084 other upstream 365804 39963768 ~ 39972411 (+) True AMCG00014928
TU93074 other upstream 384958 39951188 ~ 39953257 (+) False AMCG00014925
TU93040 other upstream 462787 39873140 ~ 39875428 (+) True AMCG00014923
TU93363 other downstream 90273 40494911 ~ 40530521 (+) False AMCG00014954
TU93411 other downstream 485336 40889974 ~ 40990904 (+) True G74803
TU93556 other downstream 685137 41089775 ~ 41090612 (+) True G74925
TU93587 other downstream 809312 41213950 ~ 41215242 (+) True G74952
TU93640 other downstream 929905 41334543 ~ 41335049 (+) False AMCG00014963

Expression Profile