RNA id: AMCG00014941


Basic Information

Item Value
RNA id AMCG00014941
length 1774
RNA type mRNA
GC content 0.64
exon number 10
gene id AMCG00014941
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 40382282 ~ 40385629 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCGGCTGCGCGCTCCCGCGGCGGCGCTCGTGCTGCAGTGCCTCGTGCGCGCCGGCCTCTGCGCGCGCTTCCTCAAGAGGCGCGCGCCGCTGCCCCCCGCGCGCCCCGCCGACGTCATCCCGCGCGTCATCTGCACGGAGCGCGAGATCCGGGCGCTGTTCCGGCCCGGGGTGCGAGACGGGCTGCGCGTCATGGATGAGTCCGGGGCGAGTGTCCCTGTGCGGGACGTCCCGGCGCACTGCGGGGTGAGCGAGCACAGGGACCGGGGCGGACAGCTGGCCTTCTCCAGCGCGGTCGACGGATGCTTCGTCAACAAGGAGgcTGGGTCCCTGGCTCTGGCTCTGGGGGTGCGGCTGCACTCGGGGGAGCGCTGGTACCAGGTCAACATCACCTGCCCCGACACATTGACCCAGCCGCAGGGTGAGGTCCGGGTCAGGGGTCAGAGCAGGTCGGAGTGCCTGCCTGTGATCATGACGAGCGAGGCGGCAGTGTTTAAGTTCGGGGTGATGCAGTGCGGAGCGCAGAGAGAGGTGTACGGTCAGGTGTTCAGGTATGACGTGGAGTTGGAGGCGGAGCCAGCGGTCAGTGAGCTGGAGTTCGGCCCCGTGTCCAGAGACACTCCCTTCAGggTGCGTGTGGAGTGCCAGTACAGTGGGGCGGCTCTGGTGCGCACCGGCCTGCGGGCCCTGGACCCGCCCCTGCCCCCCCCTGCCTCGGGCCTGGGCTCCCTGAGAGTGGAGATGAGGATCGCCACGGACTCCTCCTTCACCTCATTCTACCCTCCCGAGCGCCTGCCCCTGTCGCTGCCCCTGCAGGAGCCCCTGTACGTGGAGGTCCGGGTCCGAGACCCCCCAGACCCCGGCGTGACCCTGCGCATCCGGGACTGCTTCGCCTACCCCGCCTCCCGGCACTCGCTGTGGGTGCTGCTGTACAACGGATGCCCCAACACTCTGGACAGCGAGTTCCCCAGCTCTGTGCTGGAGGGGCCGGGGGCGGCTGGGGGGGACGGGGCGTTCTACATGACTCTCCTCTCAGCCGCAGGTCAGTCGGACAGTGAGCGGCTGCGCAGACAGCTGGGTTCTGACCCGGAGGCTCGGCTGGTGTCGGTGGGTCCGGTCCGGCTGGGGAACGGCACTGCACACCGCACCCCCCCTCCGGACAGCCTGAGAACAGGGGCAGTGCTCGAGATGCTGTCGGTCTACTCCATCTCGGCCATCGGCTCtgcctccctcttcctcctcctctctgccctgGCGATGGGGCTGCTGCGGCGCCGGGCCATCCGCCGATCTGGCGTCGCCAGGGAGAGTGGGGCCGTCGCCACAGACACCGCCTCTGAGACCGTGGCCACCTCCTAGCTGGACCGATGCGCAGGAGTGTAAATAAAGCTTgaagtttgtttcagttttaatctGGGCTCTGTGGTTTTTGCAGTGTGTTGTGGCTGTAATAGTGGCGTTTAATTCTCTGGGATCTGCCTGTacagctacaggttgagctagAGCTGCTCTGACACCCCGTACATCATCCCAGAATGCATCACTTGCCCTGTGCAGCTGCTGGAGTCATTTCTGGACATCATTTCAACCACTCGTTCGCTAATGGCAGGAACAGTGATGCAGTCCCCTCCCCTTCAGCTTTTCTCCACAAACTAGTATTAGTTAATTTTCCTCAATGTCTGTAGTCAGTGTTGATATTTTTAGAGTATGAAATGGGGTTTCAGGGAATCAAGCTGTATTTATAGCCACTCTGGGAAATGAGGGCTCAACTGCC

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU93239 lncRNA upstream 2529 40303232 ~ 40379753 (+) True G74661
TU93257 lncRNA upstream 32444 40342595 ~ 40349838 (+) True G74672
TU93234 lncRNA upstream 96144 40284901 ~ 40286138 (+) True G74656
TU93224 lncRNA upstream 148862 40232774 ~ 40233420 (+) True G74649
TU93222 lncRNA upstream 150401 40231617 ~ 40231881 (+) True G74647
TU93269 lncRNA downstream 10669 40396298 ~ 40397074 (+) True G74683
TU93276 lncRNA downstream 25252 40410881 ~ 40413637 (+) True G74690
TU93372 lncRNA downstream 103572 40489201 ~ 40491346 (+) True G74768
TU93374 lncRNA downstream 144085 40529714 ~ 40530310 (+) True G74769
TU93383 lncRNA downstream 260552 40646181 ~ 40646393 (+) True G74778
AMCG00014942 mRNA upstream 8412 40371393 ~ 40373870 (+) False AMCG00014942
AMCG00014940 mRNA upstream 41993 40338242 ~ 40340289 (+) True AMCG00014940
AMCG00014943 mRNA upstream 51357 40324822 ~ 40330925 (+) True AMCG00014943
AMCG00014937 mRNA upstream 158279 40220472 ~ 40224003 (+) True AMCG00014937
AMCG00014939 mRNA upstream 170885 40210828 ~ 40211397 (+) True AMCG00014939
AMCG00014947 mRNA downstream 2277 40387906 ~ 40391206 (+) True AMCG00014947
AMCG00014948 mRNA downstream 33945 40419574 ~ 40437283 (+) True AMCG00014948
AMCG00014954 mRNA downstream 144763 40530392 ~ 40532273 (+) True AMCG00014954
AMCG00014956 mRNA downstream 342173 40727802 ~ 40729957 (+) True AMCG00014956
AMCG00014955 mRNA downstream 360067 40745696 ~ 40759910 (+) True AMCG00014955
TU93243 other upstream 8419 40331987 ~ 40373863 (+) False AMCG00014942
TU93241 other upstream 8419 40369137 ~ 40373863 (+) True AMCG00014942
TU93250 other upstream 41887 40338215 ~ 40340395 (+) False AMCG00014940
TU93215 other upstream 218285 40162016 ~ 40163997 (+) True G74643
TU93214 other upstream 221704 40159901 ~ 40160578 (+) True G74642
TU93363 other downstream 109282 40494911 ~ 40530521 (+) False AMCG00014954
TU93411 other downstream 504345 40889974 ~ 40990904 (+) True G74803
TU93556 other downstream 704146 41089775 ~ 41090612 (+) True G74925
TU93587 other downstream 828321 41213950 ~ 41215242 (+) True G74952
TU93640 other downstream 948914 41334543 ~ 41335049 (+) False AMCG00014963

Expression Profile