RNA id: AMCG00014945


Basic Information

Item Value
RNA id AMCG00014945
length 1558
RNA type mRNA
GC content 0.51
exon number 9
gene id AMCG00014945
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 40308887 ~ 40315938 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGCGGCGGAAGGCGATTTCCTGTTACGGTACAGAGCCGTTTCGAATAAGCTCAAGaaGTGTGAGCAGACTCTGTTCAATGCCCCGGGGGAGGCCCTGGCCCTGACCGAGGCTGCCCGGCTGTTCCTTCACTGTGAGCGGGAGACCCAGGCACTACGAGCCCCAGGCTTCTCCGAGCACCTGCAGGCCGCACTCAACTGCTATAGCTTTGCCATTAAGGTGTATATCGAGATGAATCAGCCAGTCATGGCGGCCAGCTTATGTCTGGAGCTGGGCAACACGCTGAAGGAGATGGGGCGGCCTGGGGAGGCTCTGGTTCACTTCCAGCGTGcagcagagctgcagagtcACACCCCTGCTGAGGCCCTGCTGGCCCTGCGTGCGCTGGCTTCCTGCAAAATACTGACACGTGAGTCTCTACCATTCACTTACACTGGGCCTGGAGGTAGGAGGATGGCCTGTCAGGAGAAGGACATCGAATCCCTGAAGTCGCTGCAGACGGAACTGTGgcctctcctctctccagaGCAGAATCACTTGCTCCACCTGGTGTTGATGGAGAGGGTCGCCCCCTCTGGGCAGGGGATATAACTACAGCCTCCCAGACTGCACTGCGgtggagaaacacacacacactgtgcggTGCTGTAGAGCCCTGTATCATTCTGCCCCACAGGACTTCACACTGTCCTCCGCTCTATTGCactccactgtgctgtgctgtattacaCCGCACTGTGTCACTGGGGAACAAGTGGGTCCGGGCTGGTCTGGGGCTGTCAGGTGTAAAGGTTGTGTAACTGGGTTGTGTTATTTGCTATATTTATCtgcctgtgtgttttttgtctagtacacacacaacctctgtctctctgtttttgtatgtttctctgtctctcagtgtgtgtctgtctgtctgtgtgtgtttccactATGGCAGCCAATCATATGGCTGGATGTCATTAGGAAGTAAAATGCTGATACAGACAAGAAGACACAATCAcgtattagttttatttatgtattttattttatttctgcatttatttcagCAAATGTAATCGAGATTCTAATTGTGTGGCataaagagaataaaatattatttttaaccatattaagcacagaaaacaagaacagtgtacatttcagtgtgagagtgtgtgtgtgtgtatataagtgTGTTGGTGGGGGGACAGTTACAGATTTTCATAGATGTCTTCACTGGAATTCTGAAGTTTGgggtcCTTTCCTAtatccttcttcttcttcctctcgcTCACTGTGTCATTCTCCTCTGGGGTCAAGGGGTCAATGGCATTGTAGATCGAGTGAGTGTGAGGCTCCAGAGCCTTGTAGACAGAGCCTGGGGTCactggctgctctctctcctccttgtcCCTCCTTCTGCACTGTTGCTCTGTATTGACACAGCACccCCTgctctccagcagcagcagcaatgatCCAATTAAACTGAACAGAGCCAGTCCAGAGCCCAGCAGCCCCACGACCAGAACCACCCAGGATGAGCCCCCGCCCCTGTAGCCCTCctctgaga

Function

GO: NA

KEGG:

id description
K20135 F8A; factor VIII intron 22 protein

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU93315 lncRNA downstream 9708 40296861 ~ 40299179 (-) True G74725
TU93190 lncRNA downstream 169786 40101893 ~ 40139101 (-) True G74625
TU93199 lncRNA downstream 179521 40128921 ~ 40129366 (-) True G74633
TU93173 lncRNA downstream 265597 40043007 ~ 40043290 (-) True G74611
TU93149 lncRNA downstream 296806 40011069 ~ 40012081 (-) False G74593
TU93327 lncRNA upstream 22126 40338064 ~ 40340395 (-) True G74736
TU93328 lncRNA upstream 22126 40338064 ~ 40360225 (-) False G74736
TU93330 lncRNA upstream 50022 40365960 ~ 40368045 (-) True G74738
TU93465 lncRNA upstream 119502 40435440 ~ 40435670 (-) True G74845
TU93475 lncRNA upstream 330244 40646182 ~ 40646384 (-) True G74854
AMCG00014946 mRNA downstream 16318 40281194 ~ 40292569 (-) True AMCG00014946
AMCG00014938 mRNA downstream 40402 40235058 ~ 40268485 (-) True AMCG00014938
AMCG00014934 mRNA downstream 144307 40162386 ~ 40164580 (-) True AMCG00014934
AMCG00014933 mRNA downstream 148538 40153419 ~ 40160349 (-) True AMCG00014933
AMCG00014935 mRNA downstream 201222 40085776 ~ 40107665 (-) True AMCG00014935
AMCG00014944 mRNA upstream 32284 40348222 ~ 40359702 (-) True AMCG00014944
AMCG00014952 mRNA upstream 78565 40394503 ~ 40398556 (-) True AMCG00014952
AMCG00014951 mRNA upstream 86828 40402766 ~ 40410777 (-) True AMCG00014951
AMCG00014953 mRNA upstream 94936 40410874 ~ 40416728 (-) True AMCG00014953
AMCG00014950 mRNA upstream 113444 40429382 ~ 40431042 (-) True AMCG00014950
TU93316 other downstream 4802 40303231 ~ 40304085 (-) True G74726
TU93314 other downstream 14361 40292156 ~ 40294526 (-) False AMCG00014946
TU93302 other downstream 72092 40236402 ~ 40236795 (-) False AMCG00014938
TU93148 other downstream 296806 39934893 ~ 40012081 (-) True G74593
TU93152 other downstream 296806 39984694 ~ 40012081 (-) False G74593
TU93349 other upstream 85845 40401783 ~ 40405328 (-) False AMCG00014951
TU93466 other upstream 121401 40437339 ~ 40534709 (-) False AMCG00014949
TU93483 other upstream 381915 40697853 ~ 40698276 (-) True G74862
TU93491 other upstream 466902 40782840 ~ 40783230 (-) True G74870
TU93508 other upstream 590443 40906381 ~ 40909386 (-) False AMCG00014958

Expression Profile