RNA id: AMCG00014951


Basic Information

Item Value
RNA id AMCG00014951
length 2274
RNA type mRNA
GC content 0.59
exon number 10
gene id AMCG00014951
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 40401783 ~ 40410777 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gcaACAAATACACTGACTGTTCAGCTTCTGTCTGGGTGGGAGAACTTGGTGTTCCCATGATTTTGTGACTCATGAgagatgaataaaataaagagggatgaagatggagggagaggggggatgCTGAGGGAGTGGTTTGGTGTGTGAAggtctttaattaaaaagctttattggcacgACTAAGTGACATCAGTGTGGCCTtgatctttctctctcctcgCTCTTGATCTGTCCGGGTCGGATGcttttccatttgatttttaattttgtgtttaatttggtttgtttttcagtttatttttattgcattggTTTGGCAGAATGTTTTTGTCTGAGGTAGTCTGAGTGTGGAGGGGGCTGCTGAGACGGTGACTAGTAGAgtaactgaaacacacacacacagcgcgaGAGCTAGACGCACACGCAGAGACCAAtacagacagacggacacacactgacaaactgacaGACGCACTCACCCATAGATGGAGACTGAAACACACGGTGGCCCTCTGGAAACTGTAATGCATTTGGGAGCTGtaatttaatgtacaataacaagaaagagacaaataaaacattagtttCATTGTACAAATGTCGATGTCCTTGTGTGGTCTGTTGATAAGTGAGCGGATACATAGTGCctcattgttttaaagtgtacCGGGCGGGGGAGAACAGAGTCCCTCTCCGCGGCGGCGGCGGCCCCCTGCTGGTCACACGGGCTCCACAGCGCAGGCGCCCGGCCATGTGAAACAGGAGCGTCAGTGCGCATGTCACTGTCCACGACCTCTCCCGGGAATAAACGGGTGTCTGCGCGCACACGGCGGACTCGTGCAGCTGCGGGGCGCTTGTCTCTCTTCGCGCACAGCGCCCTCTCGTCCCTTGTGTGTCCCTCGGCGGCCACTGTCCCGCTCTGACCCGCTTCCTTCCCAGCCCCCCTTGCGCCGTCTCAGCGCCGCCTCCGCTCGCTTTCGTTCTCTCAGAATCAAGATGGCGGACCTTTCACTGGACGATGTGATACGGCTACGCGGTTTTAACTCCAAAGCGAATACGAGAGGGGGTGGAGGTGGTGGGGGACTACGCTCACGGATCGGTGCCCCCCCCTCGGCCCCTGTGGCCCCCGTGCTGTTCCGGGGGGGAGTGGGGGCATTCGACGCTAGACAGAAAATTGGAGTATCGGACGCCAGGCAGAGACTcggggggggtggaggaggagTATTCCCAGTGAAAGACGCTCGGGAGAAACTCACCCAGAAAGACGCCAGATTCCGCATCCGAGGGGGAAGTGGTGCGGCCCCGGGGGCAGGGGCTCCGGCGGTGGTGGTCCCTGTATCGGACGCCAGGCAGGCTATCAACTCAcgcaagcagcagcagcaagtacacaataacaataaccacCACCACTCTGTACAACTACACAACACTGCCCCCCAGCTGCAGCCCCACAGCCCCCAGTCTGCCCAGTTCAACCCCCATCCACTCCTCGCTGGGCTGTCCCACTCCGTGCCTCTGTTCCTGCCTGTTGCCCAGCGAGGCTTACTGTCCAGAGTGGGCCAGGGGGCCCCTGATCAAGGGGGCGGGCCCCGCAAGCTGATGGACGCGCGGGATAGGCTGAGTCTGAAGAGGAGCATTGCGGGGGGCACGACCACCCCGGGGGCTGCCACGCCCTCCATGAAGATCACCAAGACGATACAGCAGAGGCCGGTGGGTCTGAGCAGCGGTGTGCGGATCAATGTGATGAACAGAGCGCCGGCGGGGCAGACGgGTGATGAAGACGATGGTATGTCTCTGATCCCCAGCAAGCAGATGAAGATCACCACCACCAATGACTTCGCCCAGCCTCGGgCTCATACGGTCAGTGGCTCCTGTTTCTCTCTGGGCGGCCCCCCCTTCACCAAAGTGGTTCAGAATGATGCCTACACGGCGCCGCCCCCCCCTGCCCCAGCCCAGGCGCCCCCCCCTGCCCCTGCTGCGCCCCCACAGCGCCCCCCCGCCCTGCAGCCCGAGCTGTTCTGTGTGTGCGGGGCTCTGAAGCGGGCGCGGCTCCTGAGGTCAGGGGTCGCCGAGGTCGTGTTCGTTAGGAAGGATGACGCTGTCGCCGCTTACAGGAAGTACAACAACCGCTGTCTGGATGCGCCCCGCCCCACCCCCTCACAGCCGCCCCCTGAGGTGGACCCCCAGACGGTCCTCAGAGCGCTGTTCAAATCTCCCCCCGGGCCCCCTGCTGACCCTGCCGCCCCCCCAACCGCCTTTCGCATCAAGATATAG

Function

GO: NA

KEGG:

id description
K22414 POLDIP3; polymerase delta-interacting protein 3

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU93330 lncRNA downstream 34721 40365960 ~ 40368045 (-) True G74738
TU93328 lncRNA downstream 42541 40338064 ~ 40360225 (-) False G74736
TU93327 lncRNA downstream 62371 40338064 ~ 40340395 (-) True G74736
TU93315 lncRNA downstream 103587 40296861 ~ 40299179 (-) True G74725
TU93199 lncRNA downstream 273400 40128921 ~ 40129366 (-) True G74633
TU93465 lncRNA upstream 24663 40435440 ~ 40435670 (-) True G74845
TU93475 lncRNA upstream 235405 40646182 ~ 40646384 (-) True G74854
TU93481 lncRNA upstream 285210 40695987 ~ 40696241 (-) True G74860
TU93485 lncRNA upstream 293134 40703911 ~ 40704607 (-) True G74864
TU93496 lncRNA upstream 410917 40821694 ~ 40822155 (-) True G74875
AMCG00014952 mRNA downstream 4210 40394503 ~ 40398556 (-) True AMCG00014952
AMCG00014944 mRNA downstream 43064 40348222 ~ 40359702 (-) True AMCG00014944
AMCG00014945 mRNA downstream 86828 40308887 ~ 40315938 (-) True AMCG00014945
AMCG00014946 mRNA downstream 110197 40281194 ~ 40292569 (-) True AMCG00014946
AMCG00014938 mRNA downstream 134281 40235058 ~ 40268485 (-) True AMCG00014938
AMCG00014953 mRNA upstream 97 40410874 ~ 40416728 (-) True AMCG00014953
AMCG00014950 mRNA upstream 18605 40429382 ~ 40431042 (-) True AMCG00014950
AMCG00014949 mRNA upstream 26482 40437259 ~ 40438149 (-) True AMCG00014949
AMCG00014957 mRNA upstream 475238 40886015 ~ 40898700 (-) True AMCG00014957
AMCG00014958 mRNA upstream 495448 40906225 ~ 40909451 (-) True AMCG00014958
TU93316 other downstream 98681 40303231 ~ 40304085 (-) True G74726
TU93314 other downstream 108240 40292156 ~ 40294526 (-) False AMCG00014946
TU93302 other downstream 165971 40236402 ~ 40236795 (-) False AMCG00014938
TU93152 other downstream 390685 39984694 ~ 40012081 (-) False G74593
TU93146 other downstream 451696 39944730 ~ 39951070 (-) True G74591
TU93466 other upstream 26562 40437339 ~ 40534709 (-) False AMCG00014949
TU93483 other upstream 287076 40697853 ~ 40698276 (-) True G74862
TU93491 other upstream 372063 40782840 ~ 40783230 (-) True G74870
TU93508 other upstream 495604 40906381 ~ 40909386 (-) False AMCG00014958
TU93511 other upstream 512187 40922964 ~ 40925437 (-) True G74887

Expression Profile