RNA id: AMCG00014952


Basic Information

Item Value
RNA id AMCG00014952
length 926
RNA type mRNA
GC content 0.57
exon number 8
gene id AMCG00014952
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 40394503 ~ 40398556 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GGTTGTGTGCGGGGACAGGCGGTGACGTCAGCGCTGGGGGGTTATTGACACGCACAGCTGCCCGCGAAACAGCCTCAGTGCGGCGCGACTCATCCCGCATAGCAGCGTGGGCCACACGGGCCTCTCAGAAACAGCTGCCTCACAATGTCGCTTCTGAGGCCGTACAGTAAACTGCCGGAGCTCAACACCGCCAACATACTGctGGTGGAGGCGGAGATGGAGCTGCAGGGCCGGCTGGCTGAAGCCATTCTACTGCAGGACAAAGACTTCAACACCAACGTgagGATggctcgctctctccctctcccagtcCAGGGGGAGGGCTCTCGGCCCCGAATCGACCTGCTGGTGTTCATAGTCAAcctgaggagagagagcagtctgtccTCTGTGGAGTCCTCTCTGAGACACGTGGACCAGGGCTACTGTCTGGGCAAACTGTGCTTCCTGGCAACTGAAGccCGCTGTGGTTCGGTCCCTCCTGAGCGATTGGCCAGTCTGAGGAAGCTGGCTGCGGCTCactgctgccccctgctgtTCATGGAGAGCCAGACACGagTGCTGCTGGTGTGAGCACAGCGGCCCAGAGACTCCTCTCTCTGCTGAAGGTCAGCGCTGGTCTCGTACCTGGAGCCACGGCCCTGTACCTCAGCACcctgacacactgcactgtgcccAacacactgactgactgaccgactgacacactgcactgtgcccaccagcacactgacacactgactgactgacacacactctgccTTGCACCACACCACTGACTGCTTGACTGTTGCACTGACACACTGCGTGGCTGATGTAGAAGGGCGCAGTGAAGTTAGTGCTGTATTCTGTGCTGTATTTAATGCTGCTGTAAAtagtatatttcatgttttttgcaataaatataatattagtGTGTGACTCTA

Function

GO:

id name namespace
GO:0005694 chromosome cellular_component

KEGG:

id description
K11505 CENPM; centromere protein M

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU93330 lncRNA downstream 26458 40365960 ~ 40368045 (-) True G74738
TU93328 lncRNA downstream 34278 40338064 ~ 40360225 (-) False G74736
TU93327 lncRNA downstream 54108 40338064 ~ 40340395 (-) True G74736
TU93315 lncRNA downstream 95324 40296861 ~ 40299179 (-) True G74725
TU93190 lncRNA downstream 255402 40101893 ~ 40139101 (-) True G74625
TU93465 lncRNA upstream 36884 40435440 ~ 40435670 (-) True G74845
TU93475 lncRNA upstream 247626 40646182 ~ 40646384 (-) True G74854
TU93481 lncRNA upstream 297431 40695987 ~ 40696241 (-) True G74860
TU93485 lncRNA upstream 305355 40703911 ~ 40704607 (-) True G74864
TU93496 lncRNA upstream 423138 40821694 ~ 40822155 (-) True G74875
AMCG00014944 mRNA downstream 34801 40348222 ~ 40359702 (-) True AMCG00014944
AMCG00014945 mRNA downstream 78565 40308887 ~ 40315938 (-) True AMCG00014945
AMCG00014946 mRNA downstream 101934 40281194 ~ 40292569 (-) True AMCG00014946
AMCG00014938 mRNA downstream 126018 40235058 ~ 40268485 (-) True AMCG00014938
AMCG00014934 mRNA downstream 229923 40162386 ~ 40164580 (-) True AMCG00014934
AMCG00014951 mRNA upstream 4210 40402766 ~ 40410777 (-) True AMCG00014951
AMCG00014953 mRNA upstream 12318 40410874 ~ 40416728 (-) True AMCG00014953
AMCG00014950 mRNA upstream 30826 40429382 ~ 40431042 (-) True AMCG00014950
AMCG00014949 mRNA upstream 38703 40437259 ~ 40438149 (-) True AMCG00014949
AMCG00014957 mRNA upstream 487459 40886015 ~ 40898700 (-) True AMCG00014957
TU93316 other downstream 90418 40303231 ~ 40304085 (-) True G74726
TU93314 other downstream 99977 40292156 ~ 40294526 (-) False AMCG00014946
TU93302 other downstream 157708 40236402 ~ 40236795 (-) False AMCG00014938
TU93152 other downstream 382422 39984694 ~ 40012081 (-) False G74593
TU93146 other downstream 443433 39944730 ~ 39951070 (-) True G74591
TU93349 other upstream 3227 40401783 ~ 40405328 (-) False AMCG00014951
TU93466 other upstream 38783 40437339 ~ 40534709 (-) False AMCG00014949
TU93483 other upstream 299297 40697853 ~ 40698276 (-) True G74862
TU93491 other upstream 384284 40782840 ~ 40783230 (-) True G74870
TU93508 other upstream 507825 40906381 ~ 40909386 (-) False AMCG00014958

Expression Profile