Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00014953 |
| length | 1118 |
| RNA type | mRNA |
| GC content | 0.68 |
| exon number | 9 |
| gene id | AMCG00014953 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 40410874 ~ 40416728 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006376 | mRNA splice site selection | biological_process |
| GO:0005685 | U1 snRNP | cellular_component |
| GO:0003729 | mRNA binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU93330 | lncRNA | downstream | 42829 | 40365960 ~ 40368045 (-) | True | G74738 |
| TU93328 | lncRNA | downstream | 50649 | 40338064 ~ 40360225 (-) | False | G74736 |
| TU93327 | lncRNA | downstream | 70479 | 40338064 ~ 40340395 (-) | True | G74736 |
| TU93315 | lncRNA | downstream | 111695 | 40296861 ~ 40299179 (-) | True | G74725 |
| TU93199 | lncRNA | downstream | 281508 | 40128921 ~ 40129366 (-) | True | G74633 |
| TU93465 | lncRNA | upstream | 18712 | 40435440 ~ 40435670 (-) | True | G74845 |
| TU93475 | lncRNA | upstream | 229454 | 40646182 ~ 40646384 (-) | True | G74854 |
| TU93481 | lncRNA | upstream | 279259 | 40695987 ~ 40696241 (-) | True | G74860 |
| TU93485 | lncRNA | upstream | 287183 | 40703911 ~ 40704607 (-) | True | G74864 |
| TU93496 | lncRNA | upstream | 404966 | 40821694 ~ 40822155 (-) | True | G74875 |
| AMCG00014951 | mRNA | downstream | 97 | 40402766 ~ 40410777 (-) | True | AMCG00014951 |
| AMCG00014952 | mRNA | downstream | 12318 | 40394503 ~ 40398556 (-) | True | AMCG00014952 |
| AMCG00014944 | mRNA | downstream | 51172 | 40348222 ~ 40359702 (-) | True | AMCG00014944 |
| AMCG00014945 | mRNA | downstream | 94936 | 40308887 ~ 40315938 (-) | True | AMCG00014945 |
| AMCG00014946 | mRNA | downstream | 118305 | 40281194 ~ 40292569 (-) | True | AMCG00014946 |
| AMCG00014950 | mRNA | upstream | 12654 | 40429382 ~ 40431042 (-) | True | AMCG00014950 |
| AMCG00014949 | mRNA | upstream | 20531 | 40437259 ~ 40438149 (-) | True | AMCG00014949 |
| AMCG00014957 | mRNA | upstream | 469287 | 40886015 ~ 40898700 (-) | True | AMCG00014957 |
| AMCG00014958 | mRNA | upstream | 489497 | 40906225 ~ 40909451 (-) | True | AMCG00014958 |
| AMCG00014959 | mRNA | upstream | 495466 | 40912194 ~ 40922866 (-) | True | AMCG00014959 |
| TU93349 | other | downstream | 5546 | 40401783 ~ 40405328 (-) | False | AMCG00014951 |
| TU93316 | other | downstream | 106789 | 40303231 ~ 40304085 (-) | True | G74726 |
| TU93314 | other | downstream | 116348 | 40292156 ~ 40294526 (-) | False | AMCG00014946 |
| TU93302 | other | downstream | 174079 | 40236402 ~ 40236795 (-) | False | AMCG00014938 |
| TU93152 | other | downstream | 398793 | 39984694 ~ 40012081 (-) | False | G74593 |
| TU93466 | other | upstream | 20611 | 40437339 ~ 40534709 (-) | False | AMCG00014949 |
| TU93483 | other | upstream | 281125 | 40697853 ~ 40698276 (-) | True | G74862 |
| TU93491 | other | upstream | 366112 | 40782840 ~ 40783230 (-) | True | G74870 |
| TU93508 | other | upstream | 489653 | 40906381 ~ 40909386 (-) | False | AMCG00014958 |
| TU93511 | other | upstream | 506236 | 40922964 ~ 40925437 (-) | True | G74887 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00002645 | True | 3701 | mRNA | 0.49 | 10 | NC_007112.7 | 55169130 ~ 55183088 (-) |
| grasscarp (Ctenopharyngodon idella) | CI01000303_00383082_00389531.mRNA | True | 1973 | mRNA | 0.50 | 10 | CI01000303 | 382213 ~ 389531 (-) |
