RNA id: TU93508


Basic Information

Item Value
RNA id TU93508
length 608
RNA type TUCP
GC content 0.59
exon number 6
gene id AMCG00014958
representative False

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 40906225 ~ 40909451 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATCCCCGCGCGCAGAGAGCGGCATGCGGCGCGGCTGAGGCTGAAATGGGCAGGAAGAGCAGCGCCGGGGCCAGGAGACGAACCAGCAGAACCGAGCTGACGTTCAACGACGAAGACAGGCATGAGTACCTGACGGGCTTCCATCGGCGGAAGGTGGAGAGGAGGAAGCAGGCCGTGCTGGAGATCAAGACCCGACTGAAGGAGGAGCAGAAGAAAGTGAGagaggagagacacaaagaatACCAGAAGTTGctgaaggagaggaaggaggCTCTGGagGAGGCAGATGAGCTGGAGGATCTGGTTACCGCGACGACCGAGTCCGTTCAGTATGATCACCCCAACCACACCGTCACCGTGACAACCATCAGCGACCTGGACCTCACAGGGGGGCGCCTCTGCAGCACAGGAGCCAGTGAGGATGCAGAGGAGtgtggggaggagagagaggacagcAAGGAAGAGGGGGATGATGAAGGAGAGAAAATGATCAGCACTGTGCCTAGGAAAGCTGGGGAACCCATTCTGTCTAAAAAggtctGCTCCCTTACTGCCTCCCTGCACGCCCACACCAAACAGAAGAACAGGAAAGGGCAGGGCAAGGGGCTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU93504 lncRNA downstream 23958 40882192 ~ 40882423 (-) True G74882
TU93502 lncRNA downstream 34387 40871763 ~ 40871994 (-) True G74880
TU93496 lncRNA downstream 84226 40821694 ~ 40822155 (-) True G74875
TU93485 lncRNA downstream 201774 40703911 ~ 40704607 (-) True G74864
TU93481 lncRNA downstream 210140 40695987 ~ 40696241 (-) True G74860
TU93534 lncRNA upstream 90467 40999853 ~ 41000652 (-) True G74905
TU93541 lncRNA upstream 132712 41042098 ~ 41043583 (-) True G74910
TU93582 lncRNA upstream 301653 41211039 ~ 41211311 (-) True G74950
TU93609 lncRNA upstream 353382 41262768 ~ 41263907 (-) True G74970
TU93617 lncRNA upstream 360541 41269927 ~ 41270183 (-) True G74978
AMCG00014957 mRNA downstream 7681 40886015 ~ 40898700 (-) True AMCG00014957
AMCG00014949 mRNA downstream 468232 40437259 ~ 40438149 (-) True AMCG00014949
AMCG00014950 mRNA downstream 475339 40429382 ~ 40431042 (-) True AMCG00014950
AMCG00014953 mRNA downstream 489653 40410874 ~ 40416728 (-) True AMCG00014953
AMCG00014951 mRNA downstream 495604 40402766 ~ 40410777 (-) True AMCG00014951
AMCG00014959 mRNA upstream 2808 40912194 ~ 40922866 (-) True AMCG00014959
AMCG00014962 mRNA upstream 80286 40989672 ~ 40990791 (-) True AMCG00014962
AMCG00014967 mRNA upstream 268498 41177884 ~ 41226807 (-) True AMCG00014967
AMCG00014964 mRNA upstream 421052 41330438 ~ 41331770 (-) False AMCG00014964
AMCG00014972 mRNA upstream 504026 41413412 ~ 41416011 (-) True AMCG00014972
TU93491 other downstream 123151 40782840 ~ 40783230 (-) True G74870
TU93483 other downstream 208105 40697853 ~ 40698276 (-) True G74862
TU93466 other downstream 371672 40437339 ~ 40534709 (-) False AMCG00014949
TU93349 other downstream 501053 40401783 ~ 40405328 (-) False AMCG00014951
TU93316 other downstream 602296 40303231 ~ 40304085 (-) True G74726
TU93511 other upstream 13578 40922964 ~ 40925437 (-) True G74887
TU93516 other upstream 22411 40931797 ~ 40933954 (-) True G74890
TU93577 other upstream 259655 41169041 ~ 41169551 (-) True G74945
TU93668 other upstream 419927 41329313 ~ 41331666 (-) True AMCG00014964
TU93726 other upstream 560908 41470294 ~ 41472194 (-) True AMCG00014971

Expression Profile