Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00014975 |
| length | 1182 |
| RNA type | mRNA |
| GC content | 0.58 |
| exon number | 14 |
| gene id | AMCG00014975 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 41463594 ~ 41469552 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006200 | obsolete ATP catabolic process | biological_process |
| GO:0007131 | reciprocal meiotic recombination | biological_process |
| GO:0006281 | DNA repair | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0005524 | ATP binding | molecular_function |
| GO:0003690 | double-stranded DNA binding | molecular_function |
| GO:0000150 | recombinase activity | molecular_function |
| GO:0003697 | single-stranded DNA binding | molecular_function |
| GO:0008094 | DNA-dependent ATPase activity | molecular_function |
| id | description |
|---|---|
| K10872 | DMC1; meiotic recombination protein DMC1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU93716 | lncRNA | downstream | 12261 | 41450090 ~ 41451333 (-) | True | G75064 |
| TU93685 | lncRNA | downstream | 53982 | 41406917 ~ 41409612 (-) | True | G75035 |
| TU93682 | lncRNA | downstream | 57795 | 41405462 ~ 41405799 (-) | True | G75032 |
| TU93617 | lncRNA | downstream | 193411 | 41269927 ~ 41270183 (-) | True | G74978 |
| TU93609 | lncRNA | downstream | 199687 | 41262768 ~ 41263907 (-) | True | G74970 |
| TU93744 | lncRNA | upstream | 83905 | 41553457 ~ 41554704 (-) | False | AMCG00014978 |
| TU93821 | lncRNA | upstream | 181784 | 41651336 ~ 41673042 (-) | True | G75145 |
| TU93820 | lncRNA | upstream | 200604 | 41670156 ~ 41672310 (-) | True | G75144 |
| TU93838 | lncRNA | upstream | 295980 | 41765532 ~ 41766815 (-) | False | AMCG00014981 |
| TU93849 | lncRNA | upstream | 342781 | 41812333 ~ 41815261 (-) | True | G75170 |
| AMCG00014973 | mRNA | downstream | 2731 | 41452443 ~ 41460863 (-) | True | AMCG00014973 |
| AMCG00014974 | mRNA | downstream | 27966 | 41421861 ~ 41435628 (-) | True | AMCG00014974 |
| AMCG00014972 | mRNA | downstream | 47583 | 41413412 ~ 41416011 (-) | True | AMCG00014972 |
| AMCG00014964 | mRNA | downstream | 131824 | 41330438 ~ 41331770 (-) | False | AMCG00014964 |
| AMCG00014967 | mRNA | downstream | 236787 | 41177884 ~ 41226807 (-) | True | AMCG00014967 |
| AMCG00014971 | mRNA | upstream | 1262 | 41470814 ~ 41474481 (-) | False | AMCG00014971 |
| AMCG00014977 | mRNA | upstream | 19337 | 41488889 ~ 41515465 (-) | True | AMCG00014977 |
| AMCG00014978 | mRNA | upstream | 68734 | 41538286 ~ 41561967 (-) | True | AMCG00014978 |
| AMCG00014984 | mRNA | upstream | 205232 | 41674784 ~ 41687445 (-) | True | AMCG00014984 |
| AMCG00014985 | mRNA | upstream | 219001 | 41688553 ~ 41689983 (-) | True | AMCG00014985 |
| TU93668 | other | downstream | 131928 | 41329313 ~ 41331666 (-) | True | AMCG00014964 |
| TU93577 | other | downstream | 294043 | 41169041 ~ 41169551 (-) | True | G74945 |
| TU93516 | other | downstream | 529640 | 40931797 ~ 40933954 (-) | True | G74890 |
| TU93511 | other | downstream | 538157 | 40922964 ~ 40925437 (-) | True | G74887 |
| TU93508 | other | downstream | 554208 | 40906381 ~ 40909386 (-) | False | AMCG00014958 |
| TU93726 | other | upstream | 742 | 41470294 ~ 41472194 (-) | True | AMCG00014971 |
| TU93975 | other | upstream | 649735 | 42119287 ~ 42131232 (-) | True | G75272 |
| TU94096 | other | upstream | 822369 | 42291921 ~ 42292295 (-) | True | G75370 |
| TU94183 | other | upstream | 1039317 | 42508869 ~ 42513574 (-) | False | AMCG00015031 |
| TU94191 | other | upstream | 1054167 | 42523719 ~ 42534278 (-) | False | AMCG00015028 |
