RNA id: TU93838


Basic Information

Item Value
RNA id TU93838
length 326
lncRNA type sense_over
GC content 0.43
exon number 3
gene id AMCG00014981
representative False

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 41755606 ~ 41766826 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CATTTATTCACTTTTACAGACACTGTGCCAAACAGCTAGTCTGACTGTTTGTCTGTGCCATGGAAAGAGACAGCAGACAGGGGAACTCTGCCAACATGGAGAAAGAGACTGAAAATGGATTCATCTTTGGAGGTCTTATTGGGGATGGAAGTCTGTGAAGTGGGTGCTGATTTTCTGCTTTTGCTATGATAACAATGTCTCTTTCCACATTGGTTACTTTCCTCTCCATCTCTgattccctctctctgtgtctttagtccatttgcatgtgtttattaGTGAGTGATTTTCTGTCTCTACCaccttcttttctttccctcgCTCCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU93821 lncRNA downstream 92490 41651336 ~ 41673042 (-) True G75145
TU93820 lncRNA downstream 93222 41670156 ~ 41672310 (-) True G75144
TU93744 lncRNA downstream 210828 41553457 ~ 41554704 (-) False AMCG00014978
TU93716 lncRNA downstream 314199 41450090 ~ 41451333 (-) True G75064
TU93685 lncRNA downstream 355920 41406917 ~ 41409612 (-) True G75035
TU93849 lncRNA upstream 45518 41812333 ~ 41815261 (-) True G75170
TU93942 lncRNA upstream 210940 41977755 ~ 41991977 (-) True G75241
TU93949 lncRNA upstream 226748 41993563 ~ 42022081 (-) True G75247
TU93955 lncRNA upstream 293563 42060378 ~ 42063901 (-) True AMCG00015010
TU94054 lncRNA upstream 400709 42167524 ~ 42167876 (-) True G75333
AMCG00014982 mRNA downstream 41295 41704455 ~ 41724237 (-) True AMCG00014982
AMCG00014983 mRNA downstream 66844 41690877 ~ 41698688 (-) True AMCG00014983
AMCG00014985 mRNA downstream 75549 41688553 ~ 41689983 (-) True AMCG00014985
AMCG00014984 mRNA downstream 78087 41674784 ~ 41687445 (-) True AMCG00014984
AMCG00014978 mRNA downstream 203565 41538286 ~ 41561967 (-) True AMCG00014978
AMCG00014987 mRNA upstream 13371 41780186 ~ 41796064 (-) True AMCG00014987
AMCG00014994 mRNA upstream 48922 41815737 ~ 41822547 (-) True AMCG00014994
AMCG00014993 mRNA upstream 61294 41828109 ~ 41837721 (-) True AMCG00014993
AMCG00014992 mRNA upstream 79044 41845859 ~ 41849769 (-) True AMCG00014992
AMCG00014991 mRNA upstream 199249 41966064 ~ 41968712 (-) True AMCG00014991
TU93726 other downstream 293338 41470294 ~ 41472194 (-) True AMCG00014971
TU93668 other downstream 433866 41329313 ~ 41331666 (-) True AMCG00014964
TU93577 other downstream 595981 41169041 ~ 41169551 (-) True G74945
TU93516 other downstream 831578 40931797 ~ 40933954 (-) True G74890
TU93511 other downstream 840095 40922964 ~ 40925437 (-) True G74887
TU93975 other upstream 352472 42119287 ~ 42131232 (-) True G75272
TU94096 other upstream 525106 42291921 ~ 42292295 (-) True G75370
TU94183 other upstream 742054 42508869 ~ 42513574 (-) False AMCG00015031
TU94191 other upstream 756904 42523719 ~ 42534278 (-) False AMCG00015028
TU94277 other upstream 1033336 42800151 ~ 42803287 (-) True G75497

Expression Profile