RNA id: AMCG00014989


Basic Information

Item Value
RNA id AMCG00014989
length 1617
RNA type mRNA
GC content 0.61
exon number 4
gene id AMCG00014989
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 41979321 ~ 41982799 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGGTGTGGCACGCCGGGTGAGGGGAGGGGAAGGTGAGTGGCACCCCTTGCCTCCCCCCGATGGCGGCTGGGGCTGGATGGTGCTGCTCGGCTGCTTCATGGTCACAGGCTTCTCCTACGCCTTCCCTAAGGCTCTGAGCGTCTACTTCAAGCAGCTGATGCGCGAGCTTGGCGTGGGGTACAGCGACACGGCCTGGATCTCCTCCATCATGCTTGCCATGCTGTACGGCActggaCCGGTGTCCAGTATGTTGGTGAACAAGTTTGGCTGCCGACCGGTGATGTTGGTTGGTGGTCTGTTGGCGTCAGGGGGGATGATTACAGCGTCCTTCACCACTAACATCATCCAACTCTACCTCACCGCCGGGGTCATCACAGGCAAGACTCATGACTTCTGTCTGGGCTTGGCCCTGAACTTCCAGCCCTCCCTGATCATGCTGGGCAGCTACTTTGACAAGCGGCGGCCCCTGGCCAACGGGCTGGCGGCGGCGGGCAGCCCGGTCTTCCTGTCCACCCTCTCCCCCCTGGGGCAGCTGCTGCTGGACCACTACGGTTGGCGTGGGGGGTTCCTCATCACAGGGGGGCTGCTGCTCAACTGCTGTACCTGTGGGGCTCTCATGAGGCCACTGGAGGGCCCGCAGATGAGGGCAAGagtgggaggaggagaagggacGGTGGTCCAGGAGCTGAGAGAGATGCTGCCCTCCAGAGTGGGGGAGGAGAAGAACGGACAAAACATGAAGAGGCAGGACAGGAAGAGGATGAACAGCAACAAGACGAGCAGCAAGAAAAAGCTGCTGGATTTCAGTGTCTTCCGCAACAGGGCCTTCGTGGTGTATACCGTGGCCAAGTTCATCACAGTGCTGGGCCTGTTCGTACCCACAATCCTCCTGGTCAACTACGCCAAGGACCAGGGCATCCCCGACCAAGAGGCCGCCTTCCTGCTGTCCATCATTGGCTTCGTTGACATCGTGGCCCGCCCCACCTGTGGGGTCATCGCGGGGCTGACCTGGGTCCGGCCTCGGGTGGTCTACTTCTTCAGCCTGGCTCTACTGTTCAACGGGCTGACAGACGTGTGCTCAGCCCGGTCCACGGACTACCAGGGGCTGGTGGTGTTCTGCGTGTTCTTCGGGGTGTCTTATGGCATGGTGGGGGCACTACAGTTCGAGGTGCTCATGGGGGTGGTGGGCAGCGACTCTTTCCCCAGCGCCCTGGGCTTGGTGCTGCTGGTAGAGGCCCTGGCTGTGCTCATCGGGCCCCCATCTGCAGGCCGATTGGTCGACACCTTTAATAACTATGAGCTTATCTTCTACATGGCGGGGGGGGAGCTCATCCTGGCTTCCATCGTTCTGTGGGTGGCCTTCTACTGCTGCGTGGGGCGGAGGCAGCGTCCCCCAGACAGACCCCCAGGGGCGGAGCTGGAGGTGGATGGGGAGGCGGGACTCCCACTGGGTGGAGACAGCAGCAATGGCTTCCACCACAACCACAACTCCTCCTTGGAACTGCCGCCAGGCAATTATGCAGATGACCACACCCCCGGGGAAGGGGACCTGcgggaggaggatgaggagatGGAGCTTAATGTGGAGAGGGGAGTGGAGAGAGAAAGcttctaa

Function

GO:      GO:0044765

KEGG:

id description
K08185 SLC16A8; MFS transporter, MCT family, solute carrier family 16 (monocarboxylic acid transporters), member 8

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU93849 lncRNA downstream 164060 41812333 ~ 41815261 (-) True G75170
TU93838 lncRNA downstream 212506 41765532 ~ 41766815 (-) False AMCG00014981
TU93821 lncRNA downstream 306279 41651336 ~ 41673042 (-) True G75145
TU93820 lncRNA downstream 307011 41670156 ~ 41672310 (-) True G75144
TU93744 lncRNA downstream 424617 41553457 ~ 41554704 (-) False AMCG00014978
TU93949 lncRNA upstream 10764 41993563 ~ 42022081 (-) True G75247
TU93955 lncRNA upstream 77579 42060378 ~ 42063901 (-) True AMCG00015010
TU94054 lncRNA upstream 184725 42167524 ~ 42167876 (-) True G75333
TU94090 lncRNA upstream 303495 42286294 ~ 42286584 (-) True G75364
TU94091 lncRNA upstream 303859 42286658 ~ 42286893 (-) True G75365
AMCG00014991 mRNA downstream 10609 41966064 ~ 41968712 (-) True AMCG00014991
AMCG00014992 mRNA downstream 129552 41845859 ~ 41849769 (-) True AMCG00014992
AMCG00014993 mRNA downstream 141600 41828109 ~ 41837721 (-) True AMCG00014993
AMCG00014994 mRNA downstream 156774 41815737 ~ 41822547 (-) True AMCG00014994
AMCG00014987 mRNA downstream 183257 41780186 ~ 41796064 (-) True AMCG00014987
AMCG00014990 mRNA upstream 3176 41985975 ~ 41988707 (-) True AMCG00014990
AMCG00015001 mRNA upstream 40303 42023102 ~ 42038200 (-) True AMCG00015001
AMCG00015010 mRNA upstream 77491 42060290 ~ 42062894 (-) False AMCG00015010
AMCG00015008 mRNA upstream 81198 42063997 ~ 42070963 (-) True AMCG00015008
AMCG00015007 mRNA upstream 100245 42083044 ~ 42097284 (-) True AMCG00015007
TU93726 other downstream 507127 41470294 ~ 41472194 (-) True AMCG00014971
TU93668 other downstream 647655 41329313 ~ 41331666 (-) True AMCG00014964
TU93577 other downstream 809770 41169041 ~ 41169551 (-) True G74945
TU93516 other downstream 1045367 40931797 ~ 40933954 (-) True G74890
TU93511 other downstream 1053884 40922964 ~ 40925437 (-) True G74887
TU93975 other upstream 136488 42119287 ~ 42131232 (-) True G75272
TU94096 other upstream 309122 42291921 ~ 42292295 (-) True G75370
TU94183 other upstream 526070 42508869 ~ 42513574 (-) False AMCG00015031
TU94191 other upstream 540920 42523719 ~ 42534278 (-) False AMCG00015028
TU94277 other upstream 817352 42800151 ~ 42803287 (-) True G75497

Expression Profile