RNA id: AMCG00015012


Basic Information

Item Value
RNA id AMCG00015012
length 270
RNA type mRNA
GC content 0.63
exon number 2
gene id AMCG00015012
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 42121663 ~ 42123872 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGAGGGCGGGGCCTGTCCGGACGGGGTGAGCTGTGACTTCGCCCACAGCCCCGAGGAGCTGGCAGAGTGGCAGGAGAGACGGGACTTCTTGCGGAGGAAGCTGGCGAAGGCGCGGGAAGACATGCTGATAGCGCCCACTGACAGCGACTTCGGGAAGCAGCCCGGTCCCAACCCCCCCAGTTCTAGCTGGCAGGGTTCTGGACACTTCTGTTGTGAGTCCCCAACTTTGGACGTGACTCCCGGGGACGGTTCCCTGATTTCAGCATAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU93955 lncRNA downstream 57762 42060378 ~ 42063901 (-) True AMCG00015010
TU93949 lncRNA downstream 99582 41993563 ~ 42022081 (-) True G75247
TU93942 lncRNA downstream 129686 41977755 ~ 41991977 (-) True G75241
TU93849 lncRNA downstream 306402 41812333 ~ 41815261 (-) True G75170
TU93838 lncRNA downstream 354848 41765532 ~ 41766815 (-) False AMCG00014981
TU94054 lncRNA upstream 43652 42167524 ~ 42167876 (-) True G75333
TU94090 lncRNA upstream 162422 42286294 ~ 42286584 (-) True G75364
TU94091 lncRNA upstream 162786 42286658 ~ 42286893 (-) True G75365
TU94093 lncRNA upstream 165317 42289189 ~ 42289415 (-) True G75367
TU94094 lncRNA upstream 165718 42289590 ~ 42289858 (-) True G75368
AMCG00015006 mRNA downstream 9522 42106897 ~ 42112141 (-) True AMCG00015006
AMCG00015007 mRNA downstream 24379 42083044 ~ 42097284 (-) True AMCG00015007
AMCG00015008 mRNA downstream 50700 42063997 ~ 42070963 (-) True AMCG00015008
AMCG00015010 mRNA downstream 58769 42060290 ~ 42062894 (-) False AMCG00015010
AMCG00015001 mRNA downstream 83463 42023102 ~ 42038200 (-) True AMCG00015001
AMCG00015011 mRNA upstream 6173 42130045 ~ 42134449 (-) True AMCG00015011
AMCG00015009 mRNA upstream 11041 42134913 ~ 42147238 (-) True AMCG00015009
AMCG00015017 mRNA upstream 59816 42183688 ~ 42196495 (-) True AMCG00015017
AMCG00015016 mRNA upstream 72625 42196497 ~ 42213025 (-) True AMCG00015016
AMCG00015015 mRNA upstream 103026 42226898 ~ 42234065 (-) True AMCG00015015
TU93726 other downstream 649469 41470294 ~ 41472194 (-) True AMCG00014971
TU93668 other downstream 789997 41329313 ~ 41331666 (-) True AMCG00014964
TU93577 other downstream 952112 41169041 ~ 41169551 (-) True G74945
TU93516 other downstream 1187709 40931797 ~ 40933954 (-) True G74890
TU93511 other downstream 1196226 40922964 ~ 40925437 (-) True G74887
TU94096 other upstream 168049 42291921 ~ 42292295 (-) True G75370
TU94183 other upstream 384997 42508869 ~ 42513574 (-) False AMCG00015031
TU94191 other upstream 399847 42523719 ~ 42534278 (-) False AMCG00015028
TU94277 other upstream 676279 42800151 ~ 42803287 (-) True G75497