RNA id: AMCG00015017



Basic Information


Item Value
RNA id AMCG00015017
length 354
RNA type mRNA
GC content 0.63
exon number 5
gene id AMCG00015017
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 42183688 ~ 42196495 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGGGGGAGAGGgtggagggaggaagagggaggAGGAGGCAGCTGACACTGAGGAGGACCAACCAAGGAGACACAAGCCCCTGGGACGGAAAAGTCTGGGTTTCCATGAGGTGCTGCTCCTGGAGACTTGGGGCTGGGGCTGGCCTGGGAGTGCAGGACATAGCACCCCTGCTGGTGAGCATGGAGTAAGCAGGGGAGTGCAGGACATAGCACCCCTGCTGgtagaggaagaggaggagccaGAGCCACTGGCACCACAGCCCACCAGAGCCAGGCCCCTTGACTCAGAACCACTGCTGAGGGAGCCGGAGGACCTGCAGACGCTGCTGCGCCAGATGAAGGAGGAGAGCAGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU94054 lncRNA downstream 15812 42167524 ~ 42167876 (-) True G75333
TU93955 lncRNA downstream 119787 42060378 ~ 42063901 (-) True AMCG00015010
TU93949 lncRNA downstream 161607 41993563 ~ 42022081 (-) True G75247
TU93942 lncRNA downstream 191711 41977755 ~ 41991977 (-) True G75241
TU93849 lncRNA downstream 368427 41812333 ~ 41815261 (-) True G75170
TU94090 lncRNA upstream 89799 42286294 ~ 42286584 (-) True G75364
TU94091 lncRNA upstream 90163 42286658 ~ 42286893 (-) True G75365
TU94093 lncRNA upstream 92694 42289189 ~ 42289415 (-) True G75367
TU94094 lncRNA upstream 93095 42289590 ~ 42289858 (-) True G75368
TU94095 lncRNA upstream 93414 42289909 ~ 42290266 (-) True G75369
AMCG00015009 mRNA downstream 36450 42134913 ~ 42147238 (-) True AMCG00015009
AMCG00015011 mRNA downstream 49239 42130045 ~ 42134449 (-) True AMCG00015011
AMCG00015012 mRNA downstream 59816 42121663 ~ 42123872 (-) True AMCG00015012
AMCG00015006 mRNA downstream 71547 42106897 ~ 42112141 (-) True AMCG00015006
AMCG00015007 mRNA downstream 86404 42083044 ~ 42097284 (-) True AMCG00015007
AMCG00015016 mRNA upstream 2 42196497 ~ 42213025 (-) True AMCG00015016
AMCG00015015 mRNA upstream 30403 42226898 ~ 42234065 (-) True AMCG00015015
AMCG00015020 mRNA upstream 113228 42309723 ~ 42313025 (-) True AMCG00015020
AMCG00015022 mRNA upstream 122299 42318794 ~ 42321081 (-) True AMCG00015022
AMCG00015023 mRNA upstream 125322 42321817 ~ 42325005 (-) False AMCG00015023
TU93975 other downstream 52456 42119287 ~ 42131232 (-) True G75272
TU93726 other downstream 711494 41470294 ~ 41472194 (-) True AMCG00014971
TU93668 other downstream 852022 41329313 ~ 41331666 (-) True AMCG00014964
TU93577 other downstream 1014137 41169041 ~ 41169551 (-) True G74945
TU93516 other downstream 1249734 40931797 ~ 40933954 (-) True G74890
TU94096 other upstream 95426 42291921 ~ 42292295 (-) True G75370
TU94183 other upstream 312374 42508869 ~ 42513574 (-) False AMCG00015031
TU94191 other upstream 327224 42523719 ~ 42534278 (-) False AMCG00015028
TU94277 other upstream 603656 42800151 ~ 42803287 (-) True G75497

Expression Profile