RNA id: TU94183


Basic Information

Item Value
RNA id TU94183
length 431
RNA type TUCP
GC content 0.64
exon number 3
gene id AMCG00015031
representative False

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 42508869 ~ 42521901 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CCTGCTCAGGTCCAGTGGAGACTGTGGCTGCCAATCTGCAGGAGGGACTAGAAGCAGGGGAGGGTGTCACCCCCAAGCTACAGATGCTGCCACAGCCAGCGCAAGACACAGTCCCAGGCCAGGAATTCTCCCCCCAGGCGATCGTGCAGCTGATCCAGGCGGTGGGCCGGCGCTGGGAGCAGTATAGCACTCGGGAGCGGGGGCGGCTGTTCCAGGGCGTGCAAGAGGAGCTGGCCCAGAACGGCCAGGCCTTCCCCCTCGAGCGCATCCGCCGCAAGTGGAACAACCTGCTGGTCACCTACAAGAGGGTGCATGAGCGCGCACGCTACACCGGCCAGCACAAGACCACCTGGGAGTACTACGAGATGATGGACGCCTTGCTGAGCAGCTCCTCGAAATCCACGGCAACCACCACCTCCATGGCAACCACC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU94155 lncRNA downstream 16945 42491710 ~ 42491924 (-) True G75406
TU94151 lncRNA downstream 21151 42477008 ~ 42487718 (-) True G75403
TU94121 lncRNA downstream 162088 42345650 ~ 42346781 (-) True G75384
TU94109 lncRNA downstream 183949 42321096 ~ 42324920 (-) False AMCG00015023
TU94110 lncRNA downstream 183949 42321096 ~ 42324920 (-) True AMCG00015023
TU94188 lncRNA upstream 43055 42556629 ~ 42580140 (-) False AMCG00015035
TU94189 lncRNA upstream 62384 42575958 ~ 42580140 (-) True AMCG00015035
TU94196 lncRNA upstream 73438 42587012 ~ 42589623 (-) False AMCG00015035
TU94238 lncRNA upstream 125732 42639306 ~ 42640881 (-) True G75466
TU94240 lncRNA upstream 127910 42641484 ~ 42642433 (-) True G75467
AMCG00015027 mRNA downstream 70731 42433141 ~ 42438138 (-) True AMCG00015027
AMCG00015026 mRNA downstream 80094 42404338 ~ 42428775 (-) True AMCG00015026
AMCG00015024 mRNA downstream 119737 42388317 ~ 42389132 (-) True AMCG00015024
AMCG00015025 mRNA downstream 154354 42353501 ~ 42354515 (-) True AMCG00015025
AMCG00015021 mRNA downstream 176219 42326180 ~ 42332650 (-) True AMCG00015021
AMCG00015028 mRNA upstream 9758 42523332 ~ 42524741 (-) True AMCG00015028
AMCG00015029 mRNA upstream 29013 42542587 ~ 42552560 (-) True AMCG00015029
AMCG00015035 mRNA upstream 66441 42580015 ~ 42589346 (-) False AMCG00015035
AMCG00015036 mRNA upstream 84363 42597937 ~ 42611607 (-) True AMCG00015036
AMCG00015034 mRNA upstream 122452 42636026 ~ 42638867 (-) True AMCG00015034
TU94096 other downstream 216574 42291921 ~ 42292295 (-) True G75370
TU93975 other downstream 377637 42119287 ~ 42131232 (-) True G75272
TU93726 other downstream 1036675 41470294 ~ 41472194 (-) True AMCG00014971
TU93668 other downstream 1177203 41329313 ~ 41331666 (-) True AMCG00014964
TU93577 other downstream 1339318 41169041 ~ 41169551 (-) True G74945
TU94191 other upstream 10145 42523719 ~ 42534278 (-) False AMCG00015028
TU94277 other upstream 286577 42800151 ~ 42803287 (-) True G75497

Expression Profile