RNA id: AMCG00015039


Basic Information

Item Value
RNA id AMCG00015039
length 1067
RNA type mRNA
GC content 0.60
exon number 11
gene id AMCG00015039
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 42781868 ~ 42790274 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GTTCAGGCGCAGCGTGCGTGagcggcagcagcagcgagGGCACCACGATGGAGGGCAGGACCCACAGCAGTGGCAGCGGGGTTGCGGAAGACGAGCACTCGAGGTACCGGTCGCCCCTGGTGTCGCGCTACGCCAGCAAGGAGATGGCTTTCAACTTCAGCGAGGAGAAGAAGTTTACTACCTGGCGGAAGCTGTGGATCTACCTGGCGAAAGCACAGAAAgatCTGGGTCTGGCTGTTACGGAGGAGCAGGTTCGCGAGATGGAGGAGGGGCTTGCAGCGGGGGTGGACTGGGCGCGGGCGGCAGCTGAGGAGCGCCGGCTGCGGCACGACGTCATGGCCCACGTGCACACCTTCGCACACGCCTGCCCCAATGCTGCGCCCATCATACACCTGGGCTCCACCTCCTGCTATGTGGGGGACAACACGgatctAATAATGCTTCGTGATGGTTTTAATATACTGCTGCCCAAGctggcTCGTGTGATTCACAGGCTGGCTAACTTTGCGGAGAAGTACGCTGACCTACCCACCCTGGGGTTCACACACTTCCaGCCGGCCCAGCTGACCACCGTGGGGAAGCGGGCGTGCCTGTGGCTTCAGGAGCTGGTGATGGACGAGGGCAACCTTCGGTATGCCAGAAACAACCTGCGTTTCCGGGGGGTCAAGGGAACCACAGGTACACAGGCCAGCTTCCTGCAGCTCTTCCACGGAGACCACAGCAAGGTGGAAGAGCTGGACAGGATGGTTACAGAAATGGCCGGCTTCAAGAAGTCTTACCTAGTGACTGGTCAGACCTACAGCCGCAAGGTGGACATCGACTCGCTGACTGTGCTGTCCAGCCTGGGCGCCACTGTGCACAAGatctgcacagataTCCGTCTGCTGGCCAACCTGAAGGAGATCGAGGAGCCCTTTGAGAAGGACCAGATAGGCTCCAGTGCGATGCCCTACAAGAGGAACCCCATGCGCAGGTCCTGGgTCGTTCGTTTCCTGGCAGAGGAGGTGCGCCCCATACTGGAGCCATACAGAAACCAGATGGAAGAGAATGTTGATCTGGAGCTTTGA

Function

GO:

id name namespace
GO:0009152 purine ribonucleotide biosynthetic process biological_process
GO:0005737 cytoplasm cellular_component
GO:0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity molecular_function

KEGG:

id description
K01756 purB, ADSL; adenylosuccinate lyase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU94244 lncRNA upstream 76471 42705085 ~ 42705397 (+) True G75471
TU94167 lncRNA upstream 228061 42546004 ~ 42553807 (+) True G75414
TU94009 lncRNA upstream 454254 42326183 ~ 42327614 (+) True G75297
TU94002 lncRNA upstream 461750 42318792 ~ 42320118 (+) True G75293
TU94003 lncRNA upstream 463552 42317870 ~ 42318316 (+) True G75294
AMCG00015043 mRNA upstream 3885 42712359 ~ 42777983 (+) True AMCG00015043
AMCG00015033 mRNA upstream 132607 42640756 ~ 42649261 (+) True AMCG00015033
AMCG00015032 mRNA upstream 152406 42627206 ~ 42629462 (+) False AMCG00015032
AMCG00015037 mRNA upstream 182213 42589500 ~ 42599655 (+) True AMCG00015037
AMCG00015030 mRNA upstream 305984 42465367 ~ 42475884 (+) True AMCG00015030
AMCG00015042 mRNA downstream 9444 42799718 ~ 42810704 (+) True AMCG00015042
AMCG00015038 mRNA downstream 22456 42812730 ~ 42819134 (+) True AMCG00015038
AMCG00015041 mRNA downstream 29377 42819651 ~ 42863983 (+) True AMCG00015041
TU94209 other upstream 152375 42627133 ~ 42629493 (+) True AMCG00015032
TU94031 other upstream 308777 42425454 ~ 42473091 (+) False AMCG00015030
TU94030 other upstream 308777 42468677 ~ 42473091 (+) False AMCG00015030
TU94048 other upstream 316317 42464637 ~ 42465551 (+) False AMCG00015030
TU94007 other upstream 376680 42389869 ~ 42405188 (+) True G75295

Expression Profile