RNA id: TU84405


Basic Information

Item Value
RNA id TU84405
length 304
lncRNA type read_through
GC content 0.39
exon number 3
gene id G67587
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 169904 ~ 320321 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gagagagagagagatagagacagacagagacagagacagtgtggatAACATAAGTACCCTATGCGAAACAGGCATTGTTAGGACCTGGGaccattacagacaacagaactTGTTGATCTTATAAAATGAttgggcgagagagagagagagagagagacagacagagacagagacagtgtgaaTATGATAAACACACTATTCAAAACTGGCATTGTTAAGACCTGGGaccattacagacaacagaactTGTTGATCTTATAACGGTTTAGATTTACTaaaccattacatgtatatttaaaaaaga

Function

GO:

id name namespace
GO:0019825 oxygen binding molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU84528 lncRNA downstream 480943 801264 ~ 801464 (+) True G67684
TU84529 lncRNA downstream 484216 804537 ~ 804746 (+) True G67685
TU84535 lncRNA downstream 661518 981839 ~ 1022813 (+) True G67690
TU84543 lncRNA downstream 929778 1250099 ~ 1250314 (+) True G67698
TU84544 lncRNA downstream 955670 1275991 ~ 1276216 (+) True G67699
AMCG00014061 mRNA upstream 7494 136864 ~ 162410 (+) True AMCG00014061
AMCG00014062 mRNA upstream 33683 124143 ~ 136221 (+) True AMCG00014062
AMCG00014065 mRNA upstream 67972 97427 ~ 101932 (+) True AMCG00014065
AMCG00014071 mRNA downstream 58889 379210 ~ 386103 (+) True AMCG00014071
AMCG00014077 mRNA downstream 867238 1187559 ~ 1188536 (+) True AMCG00014077
AMCG00014083 mRNA downstream 914371 1234692 ~ 1244467 (+) True AMCG00014083
AMCG00014079 mRNA downstream 924150 1244471 ~ 1245448 (+) True AMCG00014079
AMCG00014078 mRNA downstream 964609 1284930 ~ 1285907 (+) True AMCG00014078
TU84388 other upstream 62782 58449 ~ 107122 (+) True G67577
TU84560 other downstream 1163464 1483785 ~ 1484093 (+) False AMCG00014099
TU84663 other downstream 1515111 1835432 ~ 1838125 (+) True AMCG00014104
TU84672 other downstream 1558770 1879091 ~ 1881041 (+) True G67801
TU84682 other downstream 1579899 1900220 ~ 1902615 (+) True AMCG00014111
TU84815 other downstream 1806551 2126872 ~ 2130145 (+) True G67896

Expression Profile