RNA id: TU84434


Basic Information

Item Value
RNA id TU84434
length 448
RNA type TUCP
GC content 0.60
exon number 2
gene id G67612
representative False

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 61992 ~ 171214 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

AGGCTCAGGGTCCGTCAGCAGGAGAGTGGAGCAGCAGCCGGCGTCTGTCCCCGTCCAGTCAGGAGACAGTGTGACTCTGCAGTGTACAATACACATTGGTTCAGGCATGGCTCAGGAGAAGCCCTTCCAGGACTCATTTACACCCATGGGAACAGGAGTGATCCGTGTGAGAGCAGCTCTGAGCCTGGGCTTCCTGCACAGGGCTGTGTCTATGAGCTCCCCAAGAGGAACCTCCGCTCCTCTGACGCTGGGACTTACTACTGTGCTGTGGCCACATGTGGGCAGATCCTGTTTGGCAACGGGACACGGCTGGACATtgcagGTGACCGCAGTGAGGCAGGAGGCAGTGCGGAGGGCCCGTGTGGCTGCGGGGGCCACAGTGCGCTCTCTCTCAGTGTCCTGGCTCTGGCTgcagtgctctgtgtgtttgggACGTGTGATGTGTGAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU84469 lncRNA upstream 84838 256052 ~ 320319 (-) True G67632
TU84471 lncRNA upstream 85186 256400 ~ 320620 (-) True G67633
TU84473 lncRNA upstream 98492 269706 ~ 271156 (-) True G67635
TU84477 lncRNA upstream 173200 344414 ~ 346125 (-) True G67638
TU84487 lncRNA upstream 215519 386733 ~ 386941 (-) True G67646
AMCG00014060 mRNA downstream 16711 7135 ~ 45281 (-) True AMCG00014060
AMCG00014067 mRNA upstream 8795 180009 ~ 183015 (-) True AMCG00014067
AMCG00014070 mRNA upstream 118555 289769 ~ 329417 (-) True AMCG00014070
AMCG00014074 mRNA upstream 343927 515141 ~ 527366 (-) True AMCG00014074
AMCG00014073 mRNA upstream 357949 529163 ~ 529462 (-) True AMCG00014073
AMCG00014075 mRNA upstream 362964 534178 ~ 539460 (-) True AMCG00014075
TU84527 other upstream 619314 790528 ~ 790957 (-) True G67683
TU84686 other upstream 1630448 1801662 ~ 1869448 (-) False G67813
TU84687 other upstream 1635455 1806669 ~ 1869448 (-) False G67813
TU84705 other upstream 1668951 1840165 ~ 1842445 (-) True G67825
TU84703 other upstream 1688328 1859542 ~ 1863693 (-) True G67824

Expression Profile