RNA id: TU84543


Basic Information

Item Value
RNA id TU84543
length 216
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G67698
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 1250099 ~ 1250314 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

tttttcttttgtaaaaacctctgtgaaatactcatttagaatatttgccacatcttgttcgttttccaagatacctccatttttgccctttatctgtttcacttcctcctttattgaccgcttgctgttgtaatattgaaaaaagctctttgcattggttttagctccaagagctatgtttctttctatttctctctttgctttcctgatcccttt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU84535 lncRNA upstream 227286 981839 ~ 1022813 (+) True G67690
TU84529 lncRNA upstream 445353 804537 ~ 804746 (+) True G67685
TU84528 lncRNA upstream 448635 801264 ~ 801464 (+) True G67684
TU84405 lncRNA upstream 929778 169904 ~ 320321 (+) True G67587
TU84399 lncRNA upstream 1003097 147188 ~ 247002 (+) False AMCG00014061
TU84544 lncRNA downstream 25677 1275991 ~ 1276216 (+) True G67699
TU84655 lncRNA downstream 570259 1820573 ~ 1821758 (+) True G67792
TU84650 lncRNA downstream 589851 1840165 ~ 1842445 (+) True G67789
TU84797 lncRNA downstream 826989 2077303 ~ 2077602 (+) True G67882
TU84819 lncRNA downstream 898135 2148449 ~ 2148654 (+) True G67899
AMCG00014079 mRNA upstream 4651 1244471 ~ 1245448 (+) True AMCG00014079
AMCG00014083 mRNA upstream 5632 1234692 ~ 1244467 (+) True AMCG00014083
AMCG00014077 mRNA upstream 61563 1187559 ~ 1188536 (+) True AMCG00014077
AMCG00014071 mRNA upstream 863996 379210 ~ 386103 (+) True AMCG00014071
AMCG00014069 mRNA upstream 900924 279130 ~ 349175 (+) True AMCG00014069
AMCG00014078 mRNA downstream 34616 1284930 ~ 1285907 (+) True AMCG00014078
AMCG00014085 mRNA downstream 54730 1305044 ~ 1306528 (+) True AMCG00014085
AMCG00014084 mRNA downstream 66159 1316473 ~ 1317459 (+) True AMCG00014084
AMCG00014087 mRNA downstream 67565 1317879 ~ 1333718 (+) True AMCG00014087
AMCG00014086 mRNA downstream 88742 1339056 ~ 1340036 (+) True AMCG00014086
TU84388 other upstream 1142977 58449 ~ 107122 (+) True G67577
TU84560 other downstream 233471 1483785 ~ 1484093 (+) False AMCG00014099
TU84663 other downstream 585118 1835432 ~ 1838125 (+) True AMCG00014104
TU84672 other downstream 628777 1879091 ~ 1881041 (+) True G67801
TU84682 other downstream 649906 1900220 ~ 1902615 (+) True AMCG00014111
TU84815 other downstream 876558 2126872 ~ 2130145 (+) True G67896

Expression Profile