RNA id: TU84655



Basic Information


Item Value
RNA id TU84655
length 646
lncRNA type inter_gene
GC content 0.46
exon number 2
gene id G67792
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 1820573 ~ 1821758 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


tgaataaaatatatacacatttatatttatatggaaGACAcgagagagaaaagaaacatcattttcttaaaaaacactaaaaaaggAAGACGGATCTGCACAATTGGTATTCTTgttaaataatcatcatcataaaaatagTCATGGCAATAAATAATCTCGTCACATCGTTTTCACATACCAGTTGTACAAACAATAAATTATCATCtcagtgctgtgtttctgtctccCCTCGCCCGTGCCCCCGTCTGCGACAGTCCTGGAGACTGGGGCTGCGCGGCAGTGAGCCCGGGAGAAAGACACGCTAcgaaactgcacacacacactacagcccCGGACTGCGGTCCGCAACGCTAACACACACCCTGCACACTCTGATGTGCAACTAGGGCAACTCGACTGTTCCTGCAGAAAGCCTCTGGCGGCTCTGTCAGCCAGTCCTCCTGGGTGCGTTAGTGTGCGTGTGACTaggtgtgagtgagtgagtgtgtgtatgtgtactcCCCTGTTAGATggacagtgtgtctgtgtgttagtgtgtgtgtgaagtggatAGTCAtgcctgtgctgtgctgtgttgtgttgagttgtgctgtgttgtgctgtgttgtgctgtgttgtgttgtgttgtgttgtgctgtgttNN

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU84544 lncRNA upstream 544357 1275991 ~ 1276216 (+) True G67699
TU84543 lncRNA upstream 570259 1250099 ~ 1250314 (+) True G67698
TU84535 lncRNA upstream 797760 981839 ~ 1022813 (+) True G67690
TU84529 lncRNA upstream 1015827 804537 ~ 804746 (+) True G67685
TU84528 lncRNA upstream 1019109 801264 ~ 801464 (+) True G67684
TU84650 lncRNA downstream 18407 1840165 ~ 1842445 (+) True G67789
TU84797 lncRNA downstream 255545 2077303 ~ 2077602 (+) True G67882
TU84819 lncRNA downstream 326691 2148449 ~ 2148654 (+) True G67899
TU84829 lncRNA downstream 511733 2333491 ~ 2333944 (+) True G67907
TU84830 lncRNA downstream 528371 2350129 ~ 2373305 (+) True G67908
AMCG00014100 mRNA upstream 7275 1799682 ~ 1813298 (+) True AMCG00014100
AMCG00014095 mRNA upstream 255999 1545327 ~ 1564574 (+) True AMCG00014095
AMCG00014096 mRNA upstream 275348 1541410 ~ 1545225 (+) True AMCG00014096
AMCG00014099 mRNA upstream 322969 1479919 ~ 1497604 (+) True AMCG00014099
AMCG00014089 mRNA upstream 386965 1412350 ~ 1433608 (+) True AMCG00014089
AMCG00014101 mRNA downstream 4097 1825855 ~ 1833360 (+) True AMCG00014101
AMCG00014104 mRNA downstream 14072 1835830 ~ 1838007 (+) False AMCG00014104
AMCG00014102 mRNA downstream 36920 1858678 ~ 1869442 (+) True AMCG00014102
AMCG00014103 mRNA downstream 50991 1872749 ~ 1878960 (+) True AMCG00014103
AMCG00014111 mRNA downstream 78704 1900462 ~ 1902687 (+) False AMCG00014111
TU84560 other upstream 336480 1483785 ~ 1484093 (+) False AMCG00014099
TU84388 other upstream 1713451 58449 ~ 107122 (+) True G67577
TU84663 other downstream 13674 1835432 ~ 1838125 (+) True AMCG00014104
TU84672 other downstream 57333 1879091 ~ 1881041 (+) True G67801
TU84682 other downstream 78462 1900220 ~ 1902615 (+) True AMCG00014111
TU84815 other downstream 305114 2126872 ~ 2130145 (+) True G67896
TU84895 other downstream 885082 2706840 ~ 2710329 (+) False AMCG00014146

Expression Profile