RNA id: TU84819


Basic Information

Item Value
RNA id TU84819
length 206
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G67899
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 2148449 ~ 2148654 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

cactaacaacctcactccagttagaagcaactcctctaattgacaccctctgtttcctagacatcaaccagttcataatccatctacttacattaccctgaatgcctacagcttcaaatttaaggatcagtctttggtgtggaaccttatcaaaagctttctgaaaatctaagtatatcatatcatatgctttcacctgatctaca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU84797 lncRNA upstream 70847 2077303 ~ 2077602 (+) True G67882
TU84650 lncRNA upstream 306004 1840165 ~ 1842445 (+) True G67789
TU84655 lncRNA upstream 326691 1820573 ~ 1821758 (+) True G67792
TU84544 lncRNA upstream 872233 1275991 ~ 1276216 (+) True G67699
TU84543 lncRNA upstream 898135 1250099 ~ 1250314 (+) True G67698
TU84829 lncRNA downstream 184837 2333491 ~ 2333944 (+) True G67907
TU84830 lncRNA downstream 201475 2350129 ~ 2373305 (+) True G67908
TU84919 lncRNA downstream 597590 2746244 ~ 2755484 (+) True G67983
TU84927 lncRNA downstream 618848 2767502 ~ 2768837 (+) True G67988
TU84933 lncRNA downstream 633685 2782339 ~ 2802044 (+) True G67994
AMCG00014120 mRNA upstream 35083 2083426 ~ 2113366 (+) True AMCG00014120
AMCG00014113 mRNA upstream 119938 2024598 ~ 2028511 (+) True AMCG00014113
AMCG00014112 mRNA upstream 126183 2008602 ~ 2022266 (+) True AMCG00014112
AMCG00014106 mRNA upstream 223387 1921339 ~ 1925062 (+) True AMCG00014106
AMCG00014111 mRNA upstream 245762 1900462 ~ 1902687 (+) False AMCG00014111
AMCG00014124 mRNA downstream 13103 2161757 ~ 2172540 (+) True AMCG00014124
AMCG00014122 mRNA downstream 30992 2179646 ~ 2195573 (+) True AMCG00014122
AMCG00014123 mRNA downstream 72961 2221615 ~ 2222904 (+) True AMCG00014123
AMCG00014121 mRNA downstream 90984 2239638 ~ 2253288 (+) True AMCG00014121
AMCG00014125 mRNA downstream 128055 2276709 ~ 2325390 (+) True AMCG00014125
TU84815 other upstream 18304 2126872 ~ 2130145 (+) True G67896
TU84682 other upstream 245834 1900220 ~ 1902615 (+) True AMCG00014111
TU84672 other upstream 267408 1879091 ~ 1881041 (+) True G67801
TU84663 other upstream 310324 1835432 ~ 1838125 (+) True AMCG00014104
TU84560 other upstream 664356 1483785 ~ 1484093 (+) False AMCG00014099
TU84895 other downstream 558186 2706840 ~ 2710329 (+) False AMCG00014146
TU84896 other downstream 558186 2706840 ~ 2710329 (+) False AMCG00014146
TU84897 other downstream 558186 2706840 ~ 2710329 (+) False AMCG00014146
TU84898 other downstream 560370 2709024 ~ 2710329 (+) True AMCG00014146
TU85565 other downstream 2500546 4649200 ~ 4651964 (+) True G68475

Expression Profile