RNA id: TU85456



Basic Information


Item Value
RNA id TU85456
length 356
lncRNA type inter_gene
GC content 0.49
exon number 2
gene id G68386
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 4298305 ~ 4299684 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CTGACCTGTCCAGCTCCGCAGTCTGTGCATTGATCTTGTCCAGGATGGTAGAGCTGTGTTCAGGATGTGTCCAGGATgactgagatgtgttcagggtGATAGAGATGTGTCCAGGATGATATAGATGTGTTCAGGATCAGTGAGCAGTGTTCAGGATGATAGAAATGTGTTCAGGATCAGTCAGCTGTGTTCAGGATGATAGAAATGTGTTCAGGATCAGTCAGCTGTGTTCAGGATGGTAGAGCTGTGTTCGGGATGGTAGAGATGTATTCGGGATGGTAGAGCTGTGTTCAGGATCAGTCAGCTGTGCACAGCGATGGCGTTAAACTGCCGTCTCCGGGTAACAAACAGACGCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU85381 lncRNA downstream 168564 4105518 ~ 4129741 (-) False G68336
TU85386 lncRNA downstream 168564 4105518 ~ 4129741 (-) False G68336
TU85378 lncRNA downstream 168564 4127222 ~ 4129741 (-) False G68336
TU85379 lncRNA downstream 168564 4127222 ~ 4129741 (-) True G68336
TU85367 lncRNA downstream 198378 4099564 ~ 4099927 (-) True G68325
TU85481 lncRNA upstream 116972 4416656 ~ 4416934 (-) True G68406
TU85564 lncRNA upstream 348018 4647702 ~ 4648211 (-) True G68474
TU85610 lncRNA upstream 586241 4885925 ~ 4886283 (-) True G68514
TU85633 lncRNA upstream 1034408 5334092 ~ 5334383 (-) True G68535
TU85635 lncRNA upstream 1098144 5397828 ~ 5398235 (-) True G68537
AMCG00014203 mRNA downstream 843 4293901 ~ 4297462 (-) True AMCG00014203
AMCG00014193 mRNA downstream 376990 3914862 ~ 3921315 (-) True AMCG00014193
AMCG00014191 mRNA downstream 467022 3807265 ~ 3831283 (-) True AMCG00014191
AMCG00014189 mRNA downstream 597544 3700069 ~ 3700761 (-) True AMCG00014189
AMCG00014190 mRNA downstream 620049 3657077 ~ 3678256 (-) True AMCG00014190
AMCG00014205 mRNA upstream 20510 4320194 ~ 4325828 (-) True AMCG00014205
AMCG00014206 mRNA upstream 82919 4382603 ~ 4382845 (-) True AMCG00014206
AMCG00014204 mRNA upstream 84461 4384145 ~ 4389193 (-) True AMCG00014204
AMCG00014210 mRNA upstream 212137 4511821 ~ 4520399 (-) True AMCG00014210
AMCG00014211 mRNA upstream 260479 4560163 ~ 4565944 (-) True AMCG00014211
TU85055 other downstream 1469161 2825562 ~ 2829144 (-) True G68088
TU84998 other downstream 1654398 2641059 ~ 2643907 (-) False AMCG00014144
TU84851 other downstream 1755608 2540317 ~ 2542697 (-) False AMCG00014134
TU84738 other downstream 2380123 1916727 ~ 1918182 (-) True G67843
TU84714 other downstream 2395690 1900640 ~ 1902615 (-) True G67832
TU86038 other upstream 3078404 7378088 ~ 7380780 (-) True AMCG00014271
TU86071 other upstream 3117914 7417598 ~ 7423291 (-) False AMCG00014278
TU86293 other upstream 3837647 8137331 ~ 8139126 (-) False AMCG00014297
TU86302 other upstream 3856545 8156229 ~ 8158590 (-) True AMCG00014298
TU86412 other upstream 4083601 8383285 ~ 8384224 (-) True G69156

Expression Profile