RNA id: TU85751



Basic Information


Item Value
RNA id TU85751
length 278
lncRNA type inter_gene
GC content 0.49
exon number 2
gene id G68623
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 5897070 ~ 5956185 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


aagatatcgctgctctagaggcagttcagaggagcaaccagacttattccaggtctgaagggaaagtcctactgagagactgaggacctgaaccttttcaccctggaacagaggagactacgtggggacttgatccaagtcttcaaaatcatgaagggcatcgaccacatcaaaccagaggagcttttccagatcagcagggacacacgcacccggggacacaaatggaaattgggcttcaaggcattcaagacagaaaacaggagacacttcttcac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU85700 lncRNA upstream 114684 5779378 ~ 5782386 (+) True G68589
TU85659 lncRNA upstream 193061 5657250 ~ 5704009 (+) True G68559
TU85636 lncRNA upstream 445549 5451288 ~ 5451521 (+) True G68538
TU85603 lncRNA upstream 1039840 4857029 ~ 4857230 (+) True G68509
TU85589 lncRNA upstream 1111469 4785326 ~ 4785601 (+) True G68497
TU85765 lncRNA downstream 56497 6012682 ~ 6013059 (+) True G68635
TU85767 lncRNA downstream 98350 6054535 ~ 6056347 (+) True G68637
TU85787 lncRNA downstream 117532 6073717 ~ 6110306 (+) False G68649
TU85780 lncRNA downstream 150856 6107041 ~ 6110306 (+) True G68649
TU85783 lncRNA downstream 150856 6107041 ~ 6110306 (+) False G68649
AMCG00014229 mRNA upstream 17813 5866905 ~ 5879257 (+) True AMCG00014229
AMCG00014224 mRNA upstream 122309 5755529 ~ 5774761 (+) True AMCG00014224
AMCG00014225 mRNA upstream 157149 5721897 ~ 5739921 (+) True AMCG00014225
AMCG00014223 mRNA upstream 253581 5607773 ~ 5643489 (+) True AMCG00014223
AMCG00014222 mRNA upstream 289316 5595455 ~ 5607754 (+) True AMCG00014222
AMCG00014237 mRNA downstream 77252 6033437 ~ 6054435 (+) True AMCG00014237
AMCG00014243 mRNA downstream 278618 6234803 ~ 6239921 (+) True AMCG00014243
AMCG00014253 mRNA downstream 775439 6731624 ~ 6732517 (+) True AMCG00014253
AMCG00014259 mRNA downstream 1083569 7039754 ~ 7046875 (+) True AMCG00014259
AMCG00014260 mRNA downstream 1094151 7050336 ~ 7054907 (+) True AMCG00014260
TU85565 other upstream 1245106 4649200 ~ 4651964 (+) True G68475
TU85567 other upstream 1245106 4649200 ~ 4651964 (+) False G68475
TU84896 other upstream 3186741 2706840 ~ 2710329 (+) False AMCG00014146
TU86015 other downstream 1390010 7346195 ~ 7349467 (+) True G68830
TU86046 other downstream 1457455 7413640 ~ 7416594 (+) True G68848
TU86705 other downstream 4046873 10003058 ~ 10008648 (+) True G69406
TU87778 other downstream 8380673 14336858 ~ 14356868 (+) False AMCG00014461
TU88057 other downstream 9719446 15675631 ~ 15679788 (+) True AMCG00014490

Expression Profile