RNA id: TU86807



Basic Information


Item Value
RNA id TU86807
length 311
lncRNA type inter_gene
GC content 0.43
exon number 2
gene id G69495
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 10420180 ~ 10479009 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


caaaaaagttataaattgatttgcatgttaatgggggaaataagtatttgatcccctatcaatcagcaagatttctggctcccagctgtcttttatacaggtaacgagctgagattaggagcactctcttaaagggagtgctcctaatctcagcttgttacctgtataaaagacacctgtccacagaagcaatcaatcaatcagattccaaactctccaccatggccaagaccaaaatGCTGTCCAacgatgtcagggacaagattgtagacctacacaaggctggaatgggctacaagaccatggCCAAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU86793 lncRNA downstream 79234 10337887 ~ 10340946 (-) True G69483
TU86735 lncRNA downstream 359088 10058097 ~ 10061092 (-) False AMCG00014339
TU86736 lncRNA downstream 359088 10058097 ~ 10061092 (-) True AMCG00014339
TU86727 lncRNA downstream 365905 10053737 ~ 10054275 (-) True G69427
TU86723 lncRNA downstream 402429 10015490 ~ 10017751 (-) False AMCG00014340
TU86840 lncRNA upstream 202061 10681070 ~ 10681292 (-) True G69523
TU86845 lncRNA upstream 260407 10739416 ~ 10739930 (-) True G69528
TU86847 lncRNA upstream 287591 10766600 ~ 10768258 (-) True G69530
TU86848 lncRNA upstream 294174 10773183 ~ 10773422 (-) True G69531
TU86849 lncRNA upstream 298042 10777051 ~ 10777441 (-) True G69532
AMCG00014347 mRNA downstream 91949 10318244 ~ 10328231 (-) True AMCG00014347
AMCG00014349 mRNA downstream 118819 10300003 ~ 10301361 (-) True AMCG00014349
AMCG00014348 mRNA downstream 163805 10241006 ~ 10256375 (-) True AMCG00014348
AMCG00014346 mRNA downstream 222429 10192629 ~ 10197751 (-) True AMCG00014346
AMCG00014339 mRNA downstream 358950 10058268 ~ 10061230 (-) False AMCG00014339
AMCG00014354 mRNA upstream 46604 10525613 ~ 10526969 (-) True AMCG00014354
AMCG00014353 mRNA upstream 173270 10652279 ~ 10708018 (-) True AMCG00014353
AMCG00014358 mRNA upstream 420999 10900008 ~ 10903196 (-) True AMCG00014358
AMCG00014359 mRNA upstream 482240 10961249 ~ 10974117 (-) True AMCG00014359
AMCG00014360 mRNA upstream 495456 10974465 ~ 10991144 (-) True AMCG00014360
TU86630 other downstream 1103013 9310451 ~ 9317167 (-) True AMCG00014328
TU86412 other downstream 2035956 8383285 ~ 8384224 (-) True G69156
TU86302 other downstream 2261590 8156229 ~ 8158590 (-) True AMCG00014298
TU86293 other downstream 2281054 8137331 ~ 8139126 (-) False AMCG00014297
TU86071 other downstream 2996889 7417598 ~ 7423291 (-) False AMCG00014278
TU86854 other upstream 317707 10796716 ~ 10798147 (-) True G69537
TU87063 other upstream 1181012 11660021 ~ 11662493 (-) False AMCG00014374
TU90285 other upstream 17850730 28329739 ~ 28332482 (-) True G72236
TU90581 other upstream 18910281 29389290 ~ 29398305 (-) True G72477
TU91283 other upstream 21784158 32263167 ~ 32263427 (-) True G73047

Expression Profile