RNA id: TU87845


Basic Information

Item Value
RNA id TU87845
length 232
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G70315
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 15045852 ~ 15059774 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GTTAAAGTACAGGGTCTGTTTGATATTCATCGAGGGACATCTTCATTCAGATAGTGACATCTATCGAGTTTCAACAACAATCTCTGGCTTCATTAAGACACGACTGGATTTCACACTTCACTGGCTGCACTACGTCCACAGCACCAGTGGGCTCCCTCCCCACGTGCCTCGCGGCCTTGCTATGAACTCTGCAGGATACAGGGGAGCATGCTGATCGCCAGCTGCTATCAAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU87744 lncRNA downstream 943696 14099364 ~ 14102156 (-) True G70238
TU87667 lncRNA downstream 1124522 13919521 ~ 13921330 (-) True G70169
TU87572 lncRNA downstream 1273580 13770177 ~ 13772272 (-) True G70094
TU87569 lncRNA downstream 1284432 13759226 ~ 13761420 (-) True G70091
TU87527 lncRNA downstream 1348881 13694757 ~ 13696971 (-) True G70063
TU87890 lncRNA upstream 179029 15238803 ~ 15242333 (-) True G70346
TU87964 lncRNA upstream 314464 15374238 ~ 15376774 (-) True G70402
TU87969 lncRNA upstream 323859 15383633 ~ 15386700 (-) True G70407
TU87990 lncRNA upstream 446530 15506304 ~ 15506511 (-) True G70425
TU87985 lncRNA upstream 462746 15522520 ~ 15525014 (-) True G70420
AMCG00014454 mRNA downstream 860074 14183446 ~ 14185778 (-) True AMCG00014454
AMCG00014449 mRNA downstream 867464 14167446 ~ 14178388 (-) True AMCG00014449
AMCG00014448 mRNA downstream 898350 14144163 ~ 14147502 (-) True AMCG00014448
AMCG00014453 mRNA downstream 907872 14119846 ~ 14137980 (-) True AMCG00014453
AMCG00014455 mRNA downstream 937373 14107295 ~ 14108479 (-) True AMCG00014455
AMCG00014475 mRNA upstream 120998 15180772 ~ 15188656 (-) True AMCG00014475
AMCG00014474 mRNA upstream 130337 15190111 ~ 15214067 (-) True AMCG00014474
AMCG00014473 mRNA upstream 194622 15254396 ~ 15269030 (-) True AMCG00014473
AMCG00014479 mRNA upstream 232991 15292765 ~ 15297333 (-) True AMCG00014479
AMCG00014478 mRNA upstream 242568 15302342 ~ 15303905 (-) True AMCG00014478
TU87063 other downstream 3383359 11660021 ~ 11662493 (-) False AMCG00014374
TU86854 other downstream 4247705 10796716 ~ 10798147 (-) True G69537
TU86630 other downstream 5728685 9310451 ~ 9317167 (-) True AMCG00014328
TU86412 other downstream 6661628 8383285 ~ 8384224 (-) True G69156
TU86302 other downstream 6887262 8156229 ~ 8158590 (-) True AMCG00014298
TU90285 other upstream 13269965 28329739 ~ 28332482 (-) True G72236
TU90581 other upstream 14329516 29389290 ~ 29398305 (-) True G72477
TU91283 other upstream 17203393 32263167 ~ 32263427 (-) True G73047
TU91373 other upstream 17537688 32597462 ~ 32614806 (-) True G73127
TU91374 other upstream 17537688 32597462 ~ 32619149 (-) False G73127

Expression Profile