RNA id: TU89444


Basic Information

Item Value
RNA id TU89444
length 202
lncRNA type inter_gene
GC content 0.51
exon number 1
gene id G71539
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 22961869 ~ 22962070 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gggcaacgttgaggaccgtagacgcagtggtcagccaaggaaacttactgcagcagatgaaagacacatcatgcttacttcccttcacaatcgcaagatgtccagcagtgccatcagctcagaattggcagaaaacagtgggaccctggtacacccatctactgtccggagaagtctggtcagaagtggccttcatggaaga

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU89431 lncRNA downstream 106250 22855349 ~ 22855619 (-) True G71526
TU89417 lncRNA downstream 404206 22557383 ~ 22557663 (-) True G71512
TU89398 lncRNA downstream 654922 22306634 ~ 22306947 (-) True G71496
TU89373 lncRNA downstream 733155 22225924 ~ 22228714 (-) False AMCG00014630
TU89356 lncRNA downstream 740402 22221070 ~ 22221467 (-) True G71461
TU89445 lncRNA upstream 22079 22984149 ~ 22984567 (-) True G71540
TU89467 lncRNA upstream 450546 23412616 ~ 23412984 (-) True G71561
TU89491 lncRNA upstream 743129 23705199 ~ 23705420 (-) True G71582
TU89492 lncRNA upstream 743496 23705566 ~ 23705866 (-) True G71583
TU89500 lncRNA upstream 1118478 24080548 ~ 24080747 (-) True G71591
AMCG00014631 mRNA downstream 629059 22320028 ~ 22332810 (-) True AMCG00014631
AMCG00014630 mRNA downstream 716954 22225925 ~ 22244915 (-) True AMCG00014630
AMCG00014628 mRNA downstream 836503 22119740 ~ 22125366 (-) True AMCG00014628
AMCG00014629 mRNA downstream 848238 22112182 ~ 22113631 (-) True AMCG00014629
AMCG00014627 mRNA downstream 1182368 21776406 ~ 21779501 (-) True AMCG00014627
AMCG00014633 mRNA upstream 641539 23603609 ~ 23604731 (-) True AMCG00014633
AMCG00014634 mRNA upstream 803008 23765078 ~ 24324642 (-) True AMCG00014634
AMCG00014639 mRNA upstream 1938021 24900091 ~ 24910282 (-) True AMCG00014639
AMCG00014640 mRNA upstream 1952233 24914303 ~ 24927812 (-) True AMCG00014640
AMCG00014641 mRNA upstream 1998876 24960946 ~ 24961689 (-) True AMCG00014641
TU87063 other downstream 11299376 11660021 ~ 11662493 (-) False AMCG00014374
TU86854 other downstream 12163722 10796716 ~ 10798147 (-) True G69537
TU86630 other downstream 13644702 9310451 ~ 9317167 (-) True AMCG00014328
TU86412 other downstream 14577645 8383285 ~ 8384224 (-) True G69156
TU86302 other downstream 14803279 8156229 ~ 8158590 (-) True AMCG00014298
TU90285 other upstream 5367669 28329739 ~ 28332482 (-) True G72236
TU90581 other upstream 6427220 29389290 ~ 29398305 (-) True G72477
TU91283 other upstream 9301097 32263167 ~ 32263427 (-) True G73047
TU91373 other upstream 9635392 32597462 ~ 32614806 (-) True G73127
TU91374 other upstream 9635392 32597462 ~ 32619149 (-) False G73127

Expression Profile