RNA id: TU89463


Basic Information

Item Value
RNA id TU89463
length 243
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G71557
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 23364760 ~ 23365002 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

tttttattgcttccccacattgtttggatggagaaagtgaggagtccacatagactcctaggtctttctcatgcgttacttcatctagttctgttcctcccatagtgtaattatagtggacatttttgttacctgcatgtaataccttgcacttgtccacattgaatttcatctgccaggtgtcggcccacaactgaatattatctaagtccctttgaatagcctgtgctgctgagattgtat

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU89423 lncRNA upstream 709146 22655358 ~ 22655614 (+) True G71518
TU89357 lncRNA upstream 1134064 22228426 ~ 22230696 (+) True G71462
TU89355 lncRNA upstream 1168885 22195619 ~ 22195875 (+) True G71460
TU89354 lncRNA upstream 1175833 22188639 ~ 22188927 (+) True G71459
TU89346 lncRNA upstream 1242227 22119583 ~ 22122533 (+) True G71452
TU89482 lncRNA downstream 232116 23597118 ~ 23597323 (+) True G71574
TU89490 lncRNA downstream 340161 23705163 ~ 23705434 (+) True G71581
TU89493 lncRNA downstream 543383 23908385 ~ 23908649 (+) True G71584
TU89505 lncRNA downstream 967429 24332431 ~ 24333297 (+) True G71596
TU89508 lncRNA downstream 1158643 24523645 ~ 24532961 (+) True G71598
AMCG00014632 mRNA upstream 1100760 22247781 ~ 22264000 (+) True AMCG00014632
AMCG00014624 mRNA upstream 2697580 20646339 ~ 20667180 (+) True AMCG00014624
AMCG00014619 mRNA upstream 3291690 20024521 ~ 20073070 (+) True AMCG00014619
AMCG00014618 mRNA upstream 3343066 19959589 ~ 20021694 (+) True AMCG00014618
AMCG00014617 mRNA upstream 3520718 19843152 ~ 19844042 (+) True AMCG00014617
AMCG00014635 mRNA downstream 1017765 24382767 ~ 24385815 (+) True AMCG00014635
AMCG00014636 mRNA downstream 1327284 24692286 ~ 24759297 (+) True AMCG00014636
AMCG00014638 mRNA downstream 1523531 24888533 ~ 24897009 (+) True AMCG00014638
AMCG00014637 mRNA downstream 1563029 24928031 ~ 24937965 (+) True AMCG00014637
AMCG00014643 mRNA downstream 1722012 25087014 ~ 25102638 (+) True AMCG00014643
TU89430 other upstream 509114 22855342 ~ 22855646 (+) True G71525
TU88725 other upstream 5090400 18271854 ~ 18274360 (+) True G71004
TU88601 other upstream 5916307 17403511 ~ 17448453 (+) False AMCG00014553
TU88385 other upstream 6895647 16465681 ~ 16469113 (+) False AMCG00014525
TU88218 other upstream 7231958 16129525 ~ 16132802 (+) False AMCG00014508
TU90165 other downstream 4470501 27835503 ~ 27841871 (+) True AMCG00014704
TU90175 other downstream 4503701 27868703 ~ 27879800 (+) True AMCG00014703
TU90214 other downstream 4937371 28302373 ~ 28304073 (+) True G72175
TU90740 other downstream 6486448 29851450 ~ 29851821 (+) True G72605
TU90928 other downstream 7399349 30764351 ~ 30805741 (+) False AMCG00014777

Expression Profile