RNA id: TU89593


Basic Information

Item Value
RNA id TU89593
length 223
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G71670
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 25109156 ~ 25109378 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

tgaataacactgataatctcgttatcatggcacctgtcagtgggtgggatatattaggcagcaagtgaacattttgtcctcaaagttgatgtgttggaagcaggaaaaatgggcaagcgtaaggatctgagcgactttgacaaggtccaaattgtgatggctagacgactgggtcagagcatctccaaaactgcagctcttgtggggtgttcccggtctgcag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU89583 lncRNA upstream 26278 25082659 ~ 25082878 (+) True G71662
TU89508 lncRNA upstream 576195 24523645 ~ 24532961 (+) True G71598
TU89505 lncRNA upstream 775859 24332431 ~ 24333297 (+) True G71596
TU89493 lncRNA upstream 1200507 23908385 ~ 23908649 (+) True G71584
TU89490 lncRNA upstream 1403722 23705163 ~ 23705434 (+) True G71581
TU89672 lncRNA downstream 423964 25533342 ~ 25534154 (+) True G71725
TU89720 lncRNA downstream 596080 25705458 ~ 25762742 (+) True G71763
TU89729 lncRNA downstream 636425 25745803 ~ 25748408 (+) True G71772
TU89742 lncRNA downstream 660831 25770209 ~ 25770489 (+) True G71784
TU89783 lncRNA downstream 842855 25952233 ~ 25959702 (+) True G71817
AMCG00014643 mRNA upstream 6518 25087014 ~ 25102638 (+) True AMCG00014643
AMCG00014637 mRNA upstream 171191 24928031 ~ 24937965 (+) True AMCG00014637
AMCG00014638 mRNA upstream 212147 24888533 ~ 24897009 (+) True AMCG00014638
AMCG00014636 mRNA upstream 349859 24692286 ~ 24759297 (+) True AMCG00014636
AMCG00014635 mRNA upstream 723341 24382767 ~ 24385815 (+) True AMCG00014635
AMCG00014646 mRNA downstream 14716 25124094 ~ 25126045 (+) True AMCG00014646
AMCG00014644 mRNA downstream 40425 25149803 ~ 25163635 (+) True AMCG00014644
AMCG00014648 mRNA downstream 136035 25245413 ~ 25245961 (+) True AMCG00014648
AMCG00014649 mRNA downstream 264008 25373386 ~ 25374072 (+) True AMCG00014649
AMCG00014651 mRNA downstream 370413 25479791 ~ 25505003 (+) True AMCG00014651
TU89430 other upstream 2253510 22855342 ~ 22855646 (+) True G71525
TU88725 other upstream 6834796 18271854 ~ 18274360 (+) True G71004
TU88601 other upstream 7660703 17403511 ~ 17448453 (+) False AMCG00014553
TU88385 other upstream 8640043 16465681 ~ 16469113 (+) False AMCG00014525
TU88218 other upstream 8976354 16129525 ~ 16132802 (+) False AMCG00014508
TU90165 other downstream 2726125 27835503 ~ 27841871 (+) True AMCG00014704
TU90175 other downstream 2759325 27868703 ~ 27879800 (+) True AMCG00014703
TU90214 other downstream 3192995 28302373 ~ 28304073 (+) True G72175
TU90740 other downstream 4742072 29851450 ~ 29851821 (+) True G72605
TU90928 other downstream 5654973 30764351 ~ 30805741 (+) False AMCG00014777

Expression Profile