RNA id: TU89693


Basic Information

Item Value
RNA id TU89693
length 510
lncRNA type inter_gene
GC content 0.47
exon number 2
gene id G71740
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 25590818 ~ 25591551 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

attttaaatttgacaacTGTACAATGGCTATGGTGACTGGCAAATATTATCCCATGCATGTAATTCGTTTCCATATATAATTCAAAGGTTTACCTGAACTTGACGAATAACATTTGCCAACCGTTTGCTACATCCATCTTCATGCTTAACCGACTCACTGACGACACCGTCAGCGATGATTAAGAATATCTTGGGAAGATTCGAATTTTCAGGTCCAAGTACAATAGGGTTGTTACTTTCGAGGAGGTCACACAGGAAGTTGAAGGTGTGAACAGCCTCCTCCTTGTCTTCATTCAAAGGCAGCCAGGACAGCCAGTGAGGGAGGACCTCATTGACATTGACACACTCAGGCCGGTACTTCATCACCTTCCCCACCGCCGAGATGCAGTTCTCAGTGGCGTTGACGTTCTCTTTGGCCTTCGACTCCGCAGCCTGGATCACTCCCACCAGAAGAGGAATGGCCTCTGGCAGAGAAGACATCCAGCGCACCATTAGATTAACACAGGAGAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU89674 lncRNA downstream 57638 25530938 ~ 25533180 (-) True G71727
TU89673 lncRNA downstream 81948 25508597 ~ 25508870 (-) True G71726
TU89670 lncRNA downstream 100167 25488226 ~ 25490651 (-) True G71723
TU89502 lncRNA downstream 1434670 24155730 ~ 24156148 (-) True G71593
TU89500 lncRNA downstream 1510071 24080548 ~ 24080747 (-) True G71591
TU89807 lncRNA upstream 435984 26027535 ~ 26028500 (-) True G71835
TU89847 lncRNA upstream 629643 26221194 ~ 26221397 (-) True G71871
TU89849 lncRNA upstream 643860 26235411 ~ 26235615 (-) True G71873
TU89850 lncRNA upstream 651993 26243544 ~ 26243813 (-) True G71874
TU89851 lncRNA upstream 674180 26265731 ~ 26266216 (-) True G71875
AMCG00014650 mRNA downstream 191984 25397830 ~ 25398834 (-) True AMCG00014650
AMCG00014647 mRNA downstream 351232 25165946 ~ 25239586 (-) True AMCG00014647
AMCG00014645 mRNA downstream 447450 25130338 ~ 25143368 (-) True AMCG00014645
AMCG00014642 mRNA downstream 517108 25004505 ~ 25073710 (-) True AMCG00014642
AMCG00014641 mRNA downstream 629129 24960946 ~ 24961689 (-) True AMCG00014641
AMCG00014656 mRNA upstream 118083 25709634 ~ 25729632 (-) True AMCG00014656
AMCG00014659 mRNA upstream 162297 25753848 ~ 25763919 (-) True AMCG00014659
AMCG00014658 mRNA upstream 183418 25774969 ~ 25851971 (-) True AMCG00014658
AMCG00014663 mRNA upstream 309898 25901449 ~ 25901694 (-) True AMCG00014663
AMCG00014662 mRNA upstream 310353 25901904 ~ 26035827 (-) True AMCG00014662
TU87063 other downstream 13928325 11660021 ~ 11662493 (-) False AMCG00014374
TU86854 other downstream 14792671 10796716 ~ 10798147 (-) True G69537
TU86630 other downstream 16273651 9310451 ~ 9317167 (-) True AMCG00014328
TU86412 other downstream 17206594 8383285 ~ 8384224 (-) True G69156
TU86302 other downstream 17432228 8156229 ~ 8158590 (-) True AMCG00014298
TU90285 other upstream 2738188 28329739 ~ 28332482 (-) True G72236
TU90581 other upstream 3797739 29389290 ~ 29398305 (-) True G72477
TU91283 other upstream 6671616 32263167 ~ 32263427 (-) True G73047
TU91373 other upstream 7005911 32597462 ~ 32614806 (-) True G73127
TU91374 other upstream 7005911 32597462 ~ 32619149 (-) False G73127

Expression Profile