Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU90938 |
| length | 334 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G72767 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 30836836 ~ 30837169 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0072329 | monocarboxylic acid catabolic process | biological_process |
| GO:0017001 | antibiotic catabolic process | biological_process |
| GO:0019541 | propionate metabolic process | biological_process |
| GO:0019543 | propionate catabolic process | biological_process |
| GO:0009062 | fatty acid catabolic process | biological_process |
| GO:0019626 | short-chain fatty acid catabolic process | biological_process |
| GO:0046459 | short-chain fatty acid metabolic process | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU90738 | lncRNA | upstream | 990250 | 29843467 ~ 29846586 (+) | True | AMCG00014757 |
| TU90544 | lncRNA | upstream | 1564318 | 29268329 ~ 29272518 (+) | False | AMCG00014738 |
| TU90543 | lncRNA | upstream | 1564318 | 29270851 ~ 29272518 (+) | False | AMCG00014738 |
| TU90536 | lncRNA | upstream | 1584131 | 29249246 ~ 29252705 (+) | True | AMCG00014739 |
| TU90518 | lncRNA | upstream | 1644558 | 29191971 ~ 29192278 (+) | True | G72426 |
| TU90940 | lncRNA | downstream | 4391 | 30841560 ~ 30844670 (+) | True | G72768 |
| TU90941 | lncRNA | downstream | 8993 | 30846162 ~ 30846421 (+) | True | G72769 |
| TU90963 | lncRNA | downstream | 118736 | 30955905 ~ 30956284 (+) | True | G72783 |
| TU90969 | lncRNA | downstream | 166203 | 31003372 ~ 31003788 (+) | True | G72789 |
| TU90976 | lncRNA | downstream | 306254 | 31143423 ~ 31147877 (+) | True | AMCG00014786 |
| AMCG00014777 | mRNA | upstream | 24549 | 30805623 ~ 30812287 (+) | True | AMCG00014777 |
| AMCG00014768 | mRNA | upstream | 95692 | 30728363 ~ 30741144 (+) | True | AMCG00014768 |
| AMCG00014774 | mRNA | upstream | 126416 | 30700206 ~ 30710420 (+) | True | AMCG00014774 |
| AMCG00014779 | mRNA | upstream | 176241 | 30659601 ~ 30660595 (+) | True | AMCG00014779 |
| AMCG00014772 | mRNA | upstream | 226732 | 30594129 ~ 30610104 (+) | True | AMCG00014772 |
| AMCG00014771 | mRNA | downstream | 10003 | 30847172 ~ 30851142 (+) | True | AMCG00014771 |
| AMCG00014781 | mRNA | downstream | 70000 | 30907169 ~ 30917566 (+) | True | AMCG00014781 |
| AMCG00014784 | mRNA | downstream | 186374 | 31023543 ~ 31027002 (+) | True | AMCG00014784 |
| AMCG00014783 | mRNA | downstream | 204722 | 31041891 ~ 31044741 (+) | True | AMCG00014783 |
| AMCG00014786 | mRNA | downstream | 308600 | 31145769 ~ 31146137 (+) | False | AMCG00014786 |
| TU90928 | other | upstream | 31095 | 30764351 ~ 30805741 (+) | False | AMCG00014777 |
| TU90740 | other | upstream | 985015 | 29851450 ~ 29851821 (+) | True | G72605 |
| TU90214 | other | upstream | 2532763 | 28302373 ~ 28304073 (+) | True | G72175 |
| TU90175 | other | upstream | 2957036 | 27868703 ~ 27879800 (+) | True | AMCG00014703 |
| TU90165 | other | upstream | 2994965 | 27835503 ~ 27841871 (+) | True | AMCG00014704 |
| TU90965 | other | downstream | 141047 | 30978216 ~ 30978825 (+) | True | G72785 |
| TU90966 | other | downstream | 142401 | 30979570 ~ 30980252 (+) | True | G72786 |
| TU90967 | other | downstream | 152894 | 30990063 ~ 30996363 (+) | True | G72787 |
| TU91144 | other | downstream | 879949 | 31717118 ~ 31754930 (+) | True | G72925 |
| TU91344 | other | downstream | 1705341 | 32542510 ~ 32561489 (+) | True | G73103 |
