RNA id: TU91063


Basic Information

Item Value
RNA id TU91063
length 565
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G72868
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 31466492 ~ 31467056 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TTTTGAAAACGTATCATGTCCTACACCAGCATCTAGTCTGTATGTTAAGAAACCTTTTAGAAAACCCAcacaaacaccaaaacaaagACCACACTGGGAGCAAATGGAGTTCTTGCAACATACTTTTATCTGTTTACCTTACGTGAAGAATATGGCCAAACTACAGATTAAGCTCAGATGAAATAACCGCAATGGCTTCAGAAGCTGAAGTATACAAATCTGGATTCATACACTTTCAATAGCAGTGTGTGCTACTTGCGTCATTTCCCCCCAAGGTTCAGTCATTTACAAATTGGATTTTGACTTGTCTTCCAAAGTTGGTGgggaaaaaatcaaaacattgcaatTGGAGAGCAACCGATTGAGGTTAAAGCCTAACCTTACTGTAGCTGTTGCAGGCTTTGTTTCCTGGTCAGTGCTAGATAAAgccatatttggacagtgacagtgaaaatgccccaagaacaagcaggaactaaagacagctgcagtgcaggcctggcagagcatcaccagggaagaaacccagcatctggtgatgtctatgggttccagacttcaggta

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU91053 lncRNA downstream 2709 31462179 ~ 31463783 (-) True G72862
TU90971 lncRNA downstream 515117 30950110 ~ 30951375 (-) True G72791
TU90970 lncRNA downstream 519149 30946090 ~ 30947343 (-) True G72790
TU90944 lncRNA downstream 621544 30841523 ~ 30844948 (-) True AMCG00014775
TU90943 lncRNA downstream 622364 30841523 ~ 30844128 (-) False AMCG00014775
TU91062 lncRNA upstream 13792 31480848 ~ 31485466 (-) True G72867
TU91073 lncRNA upstream 48374 31515430 ~ 31519849 (-) True G72874
TU91074 lncRNA upstream 48374 31515430 ~ 31519932 (-) False G72874
TU91136 lncRNA upstream 230599 31697655 ~ 31698012 (-) True G72919
TU91232 lncRNA upstream 429884 31896940 ~ 31898945 (-) True G73005
AMCG00014789 mRNA downstream 121062 31337113 ~ 31345430 (-) True AMCG00014789
AMCG00014790 mRNA downstream 173757 31279314 ~ 31292735 (-) True AMCG00014790
AMCG00014791 mRNA downstream 187362 31261716 ~ 31279130 (-) True AMCG00014791
AMCG00014785 mRNA downstream 486615 30952471 ~ 30979877 (-) True AMCG00014785
AMCG00014782 mRNA downstream 541285 30922355 ~ 30925207 (-) True AMCG00014782
AMCG00014796 mRNA upstream 2503 31469559 ~ 31471622 (-) True AMCG00014796
AMCG00014794 mRNA upstream 61941 31528997 ~ 31578588 (-) True AMCG00014794
AMCG00014795 mRNA upstream 127335 31594391 ~ 31620377 (-) True AMCG00014795
AMCG00014797 mRNA upstream 233571 31700627 ~ 31707522 (-) True AMCG00014797
AMCG00014806 mRNA upstream 302517 31769573 ~ 31789737 (-) True AMCG00014806
TU90581 other downstream 2068187 29389290 ~ 29398305 (-) True G72477
TU90285 other downstream 3134010 28329739 ~ 28332482 (-) True G72236
TU87063 other downstream 19803999 11660021 ~ 11662493 (-) False AMCG00014374
TU86854 other downstream 20668345 10796716 ~ 10798147 (-) True G69537
TU86630 other downstream 22149325 9310451 ~ 9317167 (-) True AMCG00014328
TU91283 other upstream 796111 32263167 ~ 32263427 (-) True G73047
TU91373 other upstream 1130406 32597462 ~ 32614806 (-) True G73127
TU91374 other upstream 1130406 32597462 ~ 32619149 (-) False G73127
TU91480 other upstream 1334802 32801858 ~ 32806295 (-) True AMCG00014824
TU91607 other upstream 3302527 34769583 ~ 34769979 (-) True G73328

Expression Profile