RNA id: TU91373


Basic Information

Item Value
RNA id TU91373
length 685
RNA type TUCP
GC content 0.45
exon number 4
gene id G73127
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 32597462 ~ 32619149 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CAGAGATGCTGCGTATATTGCCATTACAGCATAGCTCGGATAAAACTGATCCACCTTTCGTTGTGCGGATTAACAGGGAGGTTACACCCGACCTCTCAAAGGTACTCCTGAATttacctggataagccagttacctcgCTTCGTAGTACAGCCCTCTGTTAGAGACCTTACCTGAATCCGCAGAGAAgTGCAGGGCTCTTGCAATGTGTTCTGACTGGCTCTTATGCTGCCGTGAGGTGATCTCAGGGAAAACAACTTGGAGTTTATCCTCCCTAgttttctgtgcacttctgcttTTCCTCCCCTATCATGTGACTGGTGTAAGAGTCATAAACGGTGCAGTAACAGCTACAGTGGGAGAAGACACCAATTTAACATGCAAGTTAATTGATACAAGAGAAAGCCTTTCCCAAATATCTTGGCAGAGAAAATTAGGAGCCTCATCCGAACCAGAGAACTTCCTCACCTTTGATCCTGACACAGGTCCCAATGCGGTTGGCATATTTGGGAAACGAGTGAAGTTTATAGGGAATGCATCACAAATGGAGGGATCCATTTCAATACCCAACCCGTCGATTTCAGATGAAGGCATCTACATCTGCATCTTCACATTATTCCCAAGTGGACCATATAAGCACAACATAATGCTTACTGTTAATGatgCCTGGATGGAGGCTACAGATAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU91363 lncRNA downstream 22776 32569671 ~ 32574686 (-) True G73117
TU91353 lncRNA downstream 41517 32455306 ~ 32555945 (-) False AMCG00014816
TU91358 lncRNA downstream 73660 32523238 ~ 32523802 (-) True G73112
TU91351 lncRNA downstream 131046 32450422 ~ 32466416 (-) True G73106
TU91322 lncRNA downstream 166511 32430597 ~ 32430951 (-) True G73082
TU91379 lncRNA upstream 13723 32628529 ~ 32630521 (-) True G73132
TU91436 lncRNA upstream 93207 32708013 ~ 32708283 (-) True G73181
TU91437 lncRNA upstream 95038 32709844 ~ 32710115 (-) True G73182
TU91438 lncRNA upstream 95991 32710797 ~ 32711045 (-) True G73183
TU91439 lncRNA upstream 96441 32711247 ~ 32711703 (-) True G73184
AMCG00014816 mRNA downstream 41929 32502317 ~ 32555533 (-) True AMCG00014816
AMCG00014814 mRNA downstream 274703 32321974 ~ 32322759 (-) True AMCG00014814
AMCG00014813 mRNA downstream 311526 32270685 ~ 32285936 (-) True AMCG00014813
AMCG00014809 mRNA downstream 628239 31967444 ~ 31969223 (-) True AMCG00014809
AMCG00014806 mRNA downstream 807725 31769573 ~ 31789737 (-) True AMCG00014806
AMCG00014820 mRNA upstream 14026 32628832 ~ 32641932 (-) True AMCG00014820
AMCG00014819 mRNA upstream 32728 32647534 ~ 32648995 (-) True AMCG00014819
AMCG00014818 mRNA upstream 35370 32650176 ~ 32653420 (-) True AMCG00014818
AMCG00014823 mRNA upstream 177075 32791881 ~ 32793425 (-) True AMCG00014823
AMCG00014824 mRNA upstream 180199 32795005 ~ 32806293 (-) False AMCG00014824
TU91283 other downstream 334035 32263167 ~ 32263427 (-) True G73047
TU90581 other downstream 3199157 29389290 ~ 29398305 (-) True G72477
TU90285 other downstream 4264980 28329739 ~ 28332482 (-) True G72236
TU87063 other downstream 20934969 11660021 ~ 11662493 (-) False AMCG00014374
TU86854 other downstream 21799315 10796716 ~ 10798147 (-) True G69537
TU91480 other upstream 187052 32801858 ~ 32806295 (-) True AMCG00014824
TU91607 other upstream 2154777 34769583 ~ 34769979 (-) True G73328
TU91914 other upstream 2965820 35580626 ~ 35608677 (-) True AMCG00014839
TU91940 other upstream 3486552 36101358 ~ 36182351 (-) True G73604
TU91951 other upstream 3638968 36253774 ~ 36254187 (-) True G73612

Expression Profile