RNA id: TU91552



Basic Information


Item Value
RNA id TU91552
length 244
lncRNA type inter_gene
GC content 0.40
exon number 2
gene id G73279
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 34007971 ~ 34027770 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


accatgccacgctcaaaattgcttaaatcacctttctttcacattgagacattcagtttggagttcaggagattgtcttgaccaggaccacacccctaaatgcattgaagcaactgccatgtgattggttggttagataattgcattaatgagaaattgaacaggtgttcctaataatcctttaggtgagtgtatatatatatatatcatggcacctgtcagtgggtgggatatattaggcagc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU91542 lncRNA upstream 154947 33852676 ~ 33853024 (+) True G73269
TU91534 lncRNA upstream 228498 33779223 ~ 33779473 (+) True G73261
TU91529 lncRNA upstream 282709 33645924 ~ 33725262 (+) True G73257
TU91527 lncRNA upstream 354272 33645924 ~ 33653699 (+) False G73257
TU91515 lncRNA upstream 362488 33455611 ~ 33645483 (+) False G73247
TU91560 lncRNA downstream 87576 34115346 ~ 34115704 (+) True G73285
TU91574 lncRNA downstream 265567 34293337 ~ 34293543 (+) True G73295
TU91576 lncRNA downstream 334937 34362707 ~ 34362948 (+) True G73297
TU91583 lncRNA downstream 422385 34450155 ~ 34450384 (+) True G73304
TU91600 lncRNA downstream 582410 34610180 ~ 34610412 (+) True G73321
AMCG00014827 mRNA upstream 229723 33697523 ~ 33778248 (+) True AMCG00014827
AMCG00014822 mRNA upstream 1238992 32758965 ~ 32768979 (+) True AMCG00014822
AMCG00014821 mRNA upstream 1251834 32734868 ~ 32756137 (+) True AMCG00014821
AMCG00014817 mRNA upstream 1344817 32653743 ~ 32663154 (+) True AMCG00014817
AMCG00014815 mRNA upstream 1610463 32396687 ~ 32397508 (+) True AMCG00014815
AMCG00014831 mRNA downstream 663315 34691085 ~ 34931860 (+) True AMCG00014831
AMCG00014833 mRNA downstream 1000087 35027857 ~ 35320982 (+) True AMCG00014833
AMCG00014835 mRNA downstream 1343214 35370984 ~ 35382903 (+) True AMCG00014835
AMCG00014836 mRNA downstream 1366540 35394310 ~ 35412072 (+) False AMCG00014836
AMCG00014834 mRNA downstream 1436231 35464001 ~ 35474369 (+) True AMCG00014834
TU91511 other upstream 641871 33364755 ~ 33366100 (+) True G73244
TU91344 other upstream 1446482 32542510 ~ 32561489 (+) True G73103
TU91144 other upstream 2253041 31717118 ~ 31754930 (+) True G72925
TU90967 other upstream 3011608 30990063 ~ 30996363 (+) True G72787
TU90966 other upstream 3027719 30979570 ~ 30980252 (+) True G72786
TU91569 other downstream 211164 34238934 ~ 34239400 (+) True G73292
TU91608 other downstream 752352 34780122 ~ 34780590 (+) True G73329
TU91622 other downstream 914241 34942011 ~ 34960447 (+) True G73343
TU91690 other downstream 1362864 35390634 ~ 35394649 (+) False AMCG00014836
TU92227 other downstream 3490338 37518108 ~ 37518406 (+) True G73850

Expression Profile