RNA id: TU91560



Basic Information


Item Value
RNA id TU91560
length 359
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G73285
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 34115346 ~ 34115704 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


gatcacaatatggttagctttgaggcattctttcaaaaaacaaggtccaagtctaaaacaatggtctacaattttagaaaagcaaaccttgaaggtatgagacggcacttagaagaggtagactggagcacactggatacagagttagttgaaaatggatgggtatattttaagaatatactacttgaggctcaggagcaatttgtaccaaaacttagcaaattgaggaacaaaaaacactggccaaaatggtttaatagaagtatgcaaaaaaatataaagaggaagaaaatgttgtatagcgcatacaagagggatggagactaatcaaaatacatagaatatgttgagttgcaaag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU91552 lncRNA upstream 87576 34007971 ~ 34027770 (+) True G73279
TU91542 lncRNA upstream 262322 33852676 ~ 33853024 (+) True G73269
TU91534 lncRNA upstream 335873 33779223 ~ 33779473 (+) True G73261
TU91529 lncRNA upstream 390084 33645924 ~ 33725262 (+) True G73257
TU91527 lncRNA upstream 461647 33645924 ~ 33653699 (+) False G73257
TU91574 lncRNA downstream 177633 34293337 ~ 34293543 (+) True G73295
TU91576 lncRNA downstream 247003 34362707 ~ 34362948 (+) True G73297
TU91583 lncRNA downstream 334451 34450155 ~ 34450384 (+) True G73304
TU91600 lncRNA downstream 494476 34610180 ~ 34610412 (+) True G73321
TU91605 lncRNA downstream 637833 34753537 ~ 34753771 (+) True G73326
AMCG00014827 mRNA upstream 337098 33697523 ~ 33778248 (+) True AMCG00014827
AMCG00014822 mRNA upstream 1346367 32758965 ~ 32768979 (+) True AMCG00014822
AMCG00014821 mRNA upstream 1359209 32734868 ~ 32756137 (+) True AMCG00014821
AMCG00014817 mRNA upstream 1452192 32653743 ~ 32663154 (+) True AMCG00014817
AMCG00014815 mRNA upstream 1717838 32396687 ~ 32397508 (+) True AMCG00014815
AMCG00014831 mRNA downstream 575381 34691085 ~ 34931860 (+) True AMCG00014831
AMCG00014833 mRNA downstream 912153 35027857 ~ 35320982 (+) True AMCG00014833
AMCG00014835 mRNA downstream 1255280 35370984 ~ 35382903 (+) True AMCG00014835
AMCG00014836 mRNA downstream 1278606 35394310 ~ 35412072 (+) False AMCG00014836
AMCG00014834 mRNA downstream 1348297 35464001 ~ 35474369 (+) True AMCG00014834
TU91511 other upstream 749246 33364755 ~ 33366100 (+) True G73244
TU91344 other upstream 1553857 32542510 ~ 32561489 (+) True G73103
TU91144 other upstream 2360416 31717118 ~ 31754930 (+) True G72925
TU90967 other upstream 3118983 30990063 ~ 30996363 (+) True G72787
TU90966 other upstream 3135094 30979570 ~ 30980252 (+) True G72786
TU91569 other downstream 123230 34238934 ~ 34239400 (+) True G73292
TU91608 other downstream 664418 34780122 ~ 34780590 (+) True G73329
TU91622 other downstream 826307 34942011 ~ 34960447 (+) True G73343
TU91690 other downstream 1274930 35390634 ~ 35394649 (+) False AMCG00014836
TU92227 other downstream 3402404 37518108 ~ 37518406 (+) True G73850

Expression Profile