RNA id: TU91576



Basic Information


Item Value
RNA id TU91576
length 242
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G73297
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 34362707 ~ 34362948 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


atcgaccacatcaaaccagaggagcttttccagatcagcagggacacacgcacccggggacacaaatggtaattgggcttcaaggcattcaaaacggaaaacaggagacacttctttacacagagagtagtcacaatctggaacaaactccccagcgatgtggtagaagctgaaagtttgggaacatttaaaaatagactggataggatccttggatcacttagatattaatggacaccaaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU91574 lncRNA upstream 69164 34293337 ~ 34293543 (+) True G73295
TU91560 lncRNA upstream 247003 34115346 ~ 34115704 (+) True G73285
TU91552 lncRNA upstream 334937 34007971 ~ 34027770 (+) True G73279
TU91542 lncRNA upstream 509683 33852676 ~ 33853024 (+) True G73269
TU91534 lncRNA upstream 583234 33779223 ~ 33779473 (+) True G73261
TU91583 lncRNA downstream 87207 34450155 ~ 34450384 (+) True G73304
TU91600 lncRNA downstream 247232 34610180 ~ 34610412 (+) True G73321
TU91605 lncRNA downstream 390589 34753537 ~ 34753771 (+) True G73326
TU91606 lncRNA downstream 406635 34769583 ~ 34769958 (+) True G73327
TU91640 lncRNA downstream 715711 35078659 ~ 35078896 (+) True G73354
AMCG00014827 mRNA upstream 584459 33697523 ~ 33778248 (+) True AMCG00014827
AMCG00014822 mRNA upstream 1593728 32758965 ~ 32768979 (+) True AMCG00014822
AMCG00014821 mRNA upstream 1606570 32734868 ~ 32756137 (+) True AMCG00014821
AMCG00014817 mRNA upstream 1699553 32653743 ~ 32663154 (+) True AMCG00014817
AMCG00014815 mRNA upstream 1965199 32396687 ~ 32397508 (+) True AMCG00014815
AMCG00014831 mRNA downstream 328137 34691085 ~ 34931860 (+) True AMCG00014831
AMCG00014833 mRNA downstream 664909 35027857 ~ 35320982 (+) True AMCG00014833
AMCG00014835 mRNA downstream 1008036 35370984 ~ 35382903 (+) True AMCG00014835
AMCG00014836 mRNA downstream 1031362 35394310 ~ 35412072 (+) False AMCG00014836
AMCG00014834 mRNA downstream 1101053 35464001 ~ 35474369 (+) True AMCG00014834
TU91569 other upstream 123307 34238934 ~ 34239400 (+) True G73292
TU91511 other upstream 996607 33364755 ~ 33366100 (+) True G73244
TU91344 other upstream 1801218 32542510 ~ 32561489 (+) True G73103
TU91144 other upstream 2607777 31717118 ~ 31754930 (+) True G72925
TU90967 other upstream 3366344 30990063 ~ 30996363 (+) True G72787
TU91608 other downstream 417174 34780122 ~ 34780590 (+) True G73329
TU91622 other downstream 579063 34942011 ~ 34960447 (+) True G73343
TU91690 other downstream 1027686 35390634 ~ 35394649 (+) False AMCG00014836
TU92227 other downstream 3155160 37518108 ~ 37518406 (+) True G73850
TU92541 other downstream 4069426 38432374 ~ 38432861 (+) True G74114

Expression Profile