RNA id: TU91598



Basic Information


Item Value
RNA id TU91598
length 209
lncRNA type inter_gene
GC content 0.44
exon number 2
gene id G73319
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 34569550 ~ 34603156 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ttcagtttggagttcaggagattgtcttgaccaggaccacacccctaaatgcattgaagcaactgccatgtgattggttggttagataattgcattaatgagaaattgaacaggtgttcctaataatcctttaggcaaaactgaaggcaaaacgccccaagatcaagcaggaactaaagacagctgcagtacagacctggcagagcatc

Function


GO:

id name namespace
GO:0060841 venous blood vessel development biological_process

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU91588 lncRNA downstream 106225 34462489 ~ 34463325 (-) True G73309
TU91577 lncRNA downstream 206536 34362758 ~ 34363014 (-) True G73298
TU91575 lncRNA downstream 276010 34293273 ~ 34293540 (-) True G73296
TU91566 lncRNA downstream 373304 34195967 ~ 34196246 (-) True G73291
TU91563 lncRNA downstream 445901 34123278 ~ 34123649 (-) True G73288
TU91609 lncRNA upstream 176966 34780122 ~ 34780590 (-) True G73330
TU91614 lncRNA upstream 234477 34837633 ~ 34837943 (-) True G73335
TU91615 lncRNA upstream 262369 34865525 ~ 34865745 (-) True G73336
TU91651 lncRNA upstream 620372 35223528 ~ 35223860 (-) True G73365
TU91652 lncRNA upstream 630564 35233720 ~ 35234115 (-) True G73366
AMCG00014828 mRNA downstream 4348 34564486 ~ 34565202 (-) True AMCG00014828
AMCG00014826 mRNA downstream 1135168 33127678 ~ 33434382 (-) True AMCG00014826
AMCG00014825 mRNA downstream 1450222 33070806 ~ 33119328 (-) False AMCG00014825
AMCG00014824 mRNA downstream 1763257 32795005 ~ 32806293 (-) False AMCG00014824
AMCG00014823 mRNA downstream 1776125 32791881 ~ 32793425 (-) True AMCG00014823
AMCG00014829 mRNA upstream 307437 34910593 ~ 34931646 (-) True AMCG00014829
AMCG00014830 mRNA upstream 339819 34942975 ~ 34960249 (-) True AMCG00014830
AMCG00014832 mRNA upstream 569713 35172869 ~ 35180639 (-) True AMCG00014832
AMCG00014839 mRNA upstream 978559 35581715 ~ 35592456 (-) False AMCG00014839
AMCG00014838 mRNA upstream 1031831 35634987 ~ 35688097 (-) True AMCG00014838
TU91480 other downstream 1763255 32801858 ~ 32806295 (-) True AMCG00014824
TU91374 other downstream 1950401 32597462 ~ 32619149 (-) False G73127
TU91373 other downstream 1954744 32597462 ~ 32614806 (-) True G73127
TU91283 other downstream 2306123 32263167 ~ 32263427 (-) True G73047
TU90581 other downstream 5171245 29389290 ~ 29398305 (-) True G72477
TU91607 other upstream 166427 34769583 ~ 34769979 (-) True G73328
TU91914 other upstream 977470 35580626 ~ 35608677 (-) True AMCG00014839
TU91940 other upstream 1498202 36101358 ~ 36182351 (-) True G73604
TU91951 other upstream 1650618 36253774 ~ 36254187 (-) True G73612
TU92007 other upstream 1769995 36373151 ~ 36393493 (-) True AMCG00014845

Expression Profile