RNA id: TU91605



Basic Information


Item Value
RNA id TU91605
length 235
lncRNA type intronic
GC content 0.44
exon number 1
gene id G73326
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 34753537 ~ 34753771 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


aaccaggggggcagggagctctgacaatgggagatgttcctctaaggaaagaaaaccaagggaaactgctagtaggaaagtcctgaaatgtttgtacctcaatgccaggagtataaggaacaagatgttagacttggaagccacagtgctagcatgtgactatgatgttgtaggagtgacagaaacattgcttacagaaaatgatggggatgaatacaagttggaaggatacaca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU91600 lncRNA upstream 143125 34610180 ~ 34610412 (+) True G73321
TU91583 lncRNA upstream 303153 34450155 ~ 34450384 (+) True G73304
TU91576 lncRNA upstream 390589 34362707 ~ 34362948 (+) True G73297
TU91574 lncRNA upstream 459994 34293337 ~ 34293543 (+) True G73295
TU91560 lncRNA upstream 637833 34115346 ~ 34115704 (+) True G73285
TU91606 lncRNA downstream 15812 34769583 ~ 34769958 (+) True G73327
TU91640 lncRNA downstream 324888 35078659 ~ 35078896 (+) True G73354
TU91642 lncRNA downstream 415178 35168949 ~ 35169206 (+) True G73356
TU91660 lncRNA downstream 500098 35253869 ~ 35256115 (+) True G73374
TU91667 lncRNA downstream 513873 35267644 ~ 35268081 (+) True G73380
AMCG00014827 mRNA upstream 975289 33697523 ~ 33778248 (+) True AMCG00014827
AMCG00014822 mRNA upstream 1984558 32758965 ~ 32768979 (+) True AMCG00014822
AMCG00014821 mRNA upstream 1997400 32734868 ~ 32756137 (+) True AMCG00014821
AMCG00014817 mRNA upstream 2090383 32653743 ~ 32663154 (+) True AMCG00014817
AMCG00014815 mRNA upstream 2356029 32396687 ~ 32397508 (+) True AMCG00014815
AMCG00014833 mRNA downstream 274086 35027857 ~ 35320982 (+) True AMCG00014833
AMCG00014835 mRNA downstream 617213 35370984 ~ 35382903 (+) True AMCG00014835
AMCG00014836 mRNA downstream 640539 35394310 ~ 35412072 (+) False AMCG00014836
AMCG00014834 mRNA downstream 710230 35464001 ~ 35474369 (+) True AMCG00014834
AMCG00014837 mRNA downstream 797386 35551157 ~ 35551807 (+) True AMCG00014837
TU91569 other upstream 514137 34238934 ~ 34239400 (+) True G73292
TU91511 other upstream 1387437 33364755 ~ 33366100 (+) True G73244
TU91344 other upstream 2192048 32542510 ~ 32561489 (+) True G73103
TU91144 other upstream 2998607 31717118 ~ 31754930 (+) True G72925
TU90967 other upstream 3757174 30990063 ~ 30996363 (+) True G72787
TU91608 other downstream 26351 34780122 ~ 34780590 (+) True G73329
TU91622 other downstream 188240 34942011 ~ 34960447 (+) True G73343
TU91690 other downstream 636863 35390634 ~ 35394649 (+) False AMCG00014836
TU92227 other downstream 2764337 37518108 ~ 37518406 (+) True G73850
TU92541 other downstream 3678603 38432374 ~ 38432861 (+) True G74114

Expression Profile