RNA id: TU91651



Basic Information


Item Value
RNA id TU91651
length 333
lncRNA type inter_gene
GC content 0.54
exon number 1
gene id G73365
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 35223528 ~ 35223860 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


cttttggcagtggacaggggtcagcatgggcaccctgactggtctgcggctacgcagccccatacgcaacaaactgcgatgcactgtgtgttctgacacctttctatcagaaccagcattaactttttcagcaatttgagttacagtagctcgtctgctggatcggaccacacgggccagccttcgctccccacgtgcatcaatgagccttggccacccatgaccctgttgccggttcaccgcttttccttccttggaccacttttgataggtactgaccactgcagaccaggaacaccccacaagagctgcagttttggagatgctctgacc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU91615 lncRNA downstream 357783 34865525 ~ 34865745 (-) True G73336
TU91614 lncRNA downstream 385585 34837633 ~ 34837943 (-) True G73335
TU91609 lncRNA downstream 442938 34780122 ~ 34780590 (-) True G73330
TU91598 lncRNA downstream 620372 34569550 ~ 34603156 (-) True G73319
TU91588 lncRNA downstream 760203 34462489 ~ 34463325 (-) True G73309
TU91652 lncRNA upstream 9860 35233720 ~ 35234115 (-) True G73366
TU91659 lncRNA upstream 28034 35251894 ~ 35252734 (-) True G73373
TU91665 lncRNA upstream 33606 35257466 ~ 35258943 (-) True G73378
TU91668 lncRNA upstream 43892 35267752 ~ 35268117 (-) True G73381
TU91674 lncRNA upstream 49750 35273610 ~ 35274738 (-) True G73385
AMCG00014832 mRNA downstream 42889 35172869 ~ 35180639 (-) True AMCG00014832
AMCG00014830 mRNA downstream 263279 34942975 ~ 34960249 (-) True AMCG00014830
AMCG00014829 mRNA downstream 291882 34910593 ~ 34931646 (-) True AMCG00014829
AMCG00014828 mRNA downstream 658326 34564486 ~ 34565202 (-) True AMCG00014828
AMCG00014826 mRNA downstream 1789146 33127678 ~ 33434382 (-) True AMCG00014826
AMCG00014839 mRNA upstream 357855 35581715 ~ 35592456 (-) False AMCG00014839
AMCG00014838 mRNA upstream 411127 35634987 ~ 35688097 (-) True AMCG00014838
AMCG00014841 mRNA upstream 518674 35742534 ~ 35767390 (-) True AMCG00014841
AMCG00014842 mRNA upstream 568488 35792348 ~ 35814438 (-) True AMCG00014842
AMCG00014840 mRNA upstream 754346 35978206 ~ 35986568 (-) True AMCG00014840
TU91607 other downstream 453549 34769583 ~ 34769979 (-) True G73328
TU91480 other downstream 2417233 32801858 ~ 32806295 (-) True AMCG00014824
TU91374 other downstream 2604379 32597462 ~ 32619149 (-) False G73127
TU91373 other downstream 2608722 32597462 ~ 32614806 (-) True G73127
TU91283 other downstream 2960101 32263167 ~ 32263427 (-) True G73047
TU91914 other upstream 356766 35580626 ~ 35608677 (-) True AMCG00014839
TU91940 other upstream 877498 36101358 ~ 36182351 (-) True G73604
TU91951 other upstream 1029914 36253774 ~ 36254187 (-) True G73612
TU92007 other upstream 1149291 36373151 ~ 36393493 (-) True AMCG00014845
TU92209 other upstream 2101160 37325020 ~ 37325307 (-) True G73833

Expression Profile