RNA id: TU91890


Basic Information

Item Value
RNA id TU91890
length 384
lncRNA type read_through
GC content 0.49
exon number 2
gene id G73568
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 35434969 ~ 35842991 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

tttcttgagcagggggatcTTGCGGGCACTGCAGGAtatcagtccttcacggcgtagtgttaccaattgttttcttggtgactatggtcccagctgccttgagatcattaacaagatcctcccgtgtagttctgggctgattcctcaccgttctcatgatcattgaaactccacgaggtgagatcttgcatggagccccagaccgagggagactgacatttattttgtgtttcttccatttgcgaataatcacaccaactgttgtcaccttctcaccaagctgcttggcgatggtcttgtagcccattccagccttgtgtaggtctgcaatcttgtccctgatatccttggacagctctttggtcttggccatggtggagagtt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU91864 lncRNA downstream 11834 35340673 ~ 35423135 (-) True G73548
TU91844 lncRNA downstream 74592 35275736 ~ 35360377 (-) True G73533
TU91845 lncRNA downstream 74592 35275736 ~ 35360377 (-) False G73533
TU91674 lncRNA downstream 160231 35273610 ~ 35274738 (-) True G73385
TU91668 lncRNA downstream 166852 35267752 ~ 35268117 (-) True G73381
TU91945 lncRNA upstream 213005 36055996 ~ 36057458 (-) True G73606
TU91948 lncRNA upstream 351057 36194048 ~ 36194250 (-) True G73609
TU92025 lncRNA upstream 631252 36474243 ~ 36475948 (-) True G73667
TU92063 lncRNA upstream 803068 36646059 ~ 36652043 (-) True G73704
TU92083 lncRNA upstream 846366 36689357 ~ 36730561 (-) True G73722
AMCG00014832 mRNA downstream 254330 35172869 ~ 35180639 (-) True AMCG00014832
AMCG00014830 mRNA downstream 474720 34942975 ~ 34960249 (-) True AMCG00014830
AMCG00014829 mRNA downstream 503323 34910593 ~ 34931646 (-) True AMCG00014829
AMCG00014828 mRNA downstream 869767 34564486 ~ 34565202 (-) True AMCG00014828
AMCG00014826 mRNA downstream 2000587 33127678 ~ 33434382 (-) True AMCG00014826
AMCG00014840 mRNA upstream 135215 35978206 ~ 35986568 (-) True AMCG00014840
AMCG00014843 mRNA upstream 219628 36062619 ~ 36073308 (-) True AMCG00014843
AMCG00014844 mRNA upstream 330854 36173845 ~ 36332481 (-) True AMCG00014844
AMCG00014845 mRNA upstream 530546 36373537 ~ 36390780 (-) False AMCG00014845
AMCG00014847 mRNA upstream 621463 36464454 ~ 36526810 (-) True AMCG00014847
TU91607 other downstream 664990 34769583 ~ 34769979 (-) True G73328
TU91480 other downstream 2628674 32801858 ~ 32806295 (-) True AMCG00014824
TU91374 other downstream 2815820 32597462 ~ 32619149 (-) False G73127
TU91373 other downstream 2820163 32597462 ~ 32614806 (-) True G73127
TU91283 other downstream 3171542 32263167 ~ 32263427 (-) True G73047
TU91940 other upstream 258367 36101358 ~ 36182351 (-) True G73604
TU91951 other upstream 410783 36253774 ~ 36254187 (-) True G73612
TU92007 other upstream 530160 36373151 ~ 36393493 (-) True AMCG00014845
TU92209 other upstream 1482029 37325020 ~ 37325307 (-) True G73833
TU92296 other upstream 1936342 37779333 ~ 37783575 (-) True G73916

Expression Profile