RNA id: TU91947


Basic Information

Item Value
RNA id TU91947
length 266
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G73608
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 36194050 ~ 36194315 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ctcaatgaaaaccatattcttggagatagtcaacatgggtttagacgaggcagatcatgtcttactaatttattaaaaaaatttgaacatgcaactgcagctgtagatcatgtgaaagcatatgatatgatatacttagatttccaaaaagcttttgataaggttccacaccaaagactgatcctcaaattggaagctgtatgcattcagggtaatgtaagtagatggattatgaactggttgatgtatagaaaacagagggtgtc

Function

GO: NA

KEGG:

id description
ko04974 Protein digestion and absorption

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU91836 lncRNA upstream 96102 36097280 ~ 36097948 (+) True G73525
TU91776 lncRNA upstream 451203 35740535 ~ 35742847 (+) True G73471
TU91767 lncRNA upstream 509892 35674973 ~ 35684158 (+) True G73463
TU91765 lncRNA upstream 522000 35671778 ~ 35672050 (+) True G73462
TU91732 lncRNA upstream 691616 35497197 ~ 35502434 (+) True G73431
TU91955 lncRNA downstream 63913 36258228 ~ 36258468 (+) True G73616
TU91960 lncRNA downstream 110269 36304584 ~ 36349056 (+) False G73619
TU91961 lncRNA downstream 110269 36304584 ~ 36349056 (+) True G73619
TU91986 lncRNA downstream 282293 36476608 ~ 36477950 (+) True G73638
TU91990 lncRNA downstream 295868 36490183 ~ 36500130 (+) True G73641
AMCG00014837 mRNA upstream 642243 35551157 ~ 35551807 (+) True AMCG00014837
AMCG00014834 mRNA upstream 719681 35464001 ~ 35474369 (+) True AMCG00014834
AMCG00014836 mRNA upstream 781978 35394310 ~ 35412072 (+) False AMCG00014836
AMCG00014835 mRNA upstream 811147 35370984 ~ 35382903 (+) True AMCG00014835
AMCG00014833 mRNA upstream 873068 35027857 ~ 35320982 (+) True AMCG00014833
AMCG00014848 mRNA downstream 101401 36295716 ~ 36297723 (+) True AMCG00014848
AMCG00014850 mRNA downstream 423350 36617665 ~ 36733253 (+) True AMCG00014850
AMCG00014852 mRNA downstream 719085 36913400 ~ 36914503 (+) True AMCG00014852
AMCG00014853 mRNA downstream 806315 37000630 ~ 37030062 (+) True AMCG00014853
AMCG00014862 mRNA downstream 1502345 37696660 ~ 37706352 (+) True AMCG00014862
TU91690 other upstream 799401 35390634 ~ 35394649 (+) False AMCG00014836
TU91622 other upstream 1233603 34942011 ~ 34960447 (+) True G73343
TU91608 other upstream 1413460 34780122 ~ 34780590 (+) True G73329
TU91569 other upstream 1954650 34238934 ~ 34239400 (+) True G73292
TU91511 other upstream 2827950 33364755 ~ 33366100 (+) True G73244
TU92227 other downstream 1323793 37518108 ~ 37518406 (+) True G73850
TU92541 other downstream 2238059 38432374 ~ 38432861 (+) True G74114
TU92678 other downstream 2616378 38810693 ~ 38811128 (+) True G74227
TU92814 other downstream 3141953 39336268 ~ 39475819 (+) True G74348
TU92948 other downstream 3412572 39606887 ~ 39621186 (+) True AMCG00014913

Expression Profile