RNA id: TU91955



Basic Information


Item Value
RNA id TU91955
length 241
lncRNA type inter_gene
GC content 0.51
exon number 1
gene id G73616
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 36258228 ~ 36258468 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ttcttcttttaCCCCCACTCCTCGCCATTACCATGAGACCCGAACCCTCCTGATGCTCATGGCTAGCTGCCCGGTTCATAACATTGGTGAACACGTcactaacaatgtttttagcCGCTGATTTCAAGTGGGGTCTGGCTATAGCAAAGCCTCTCTTAAGCAGGGGTACGGCCATTCTAAAGAGACCACGAAAGAGCCCTCCTAGACCGGCTCCATACATTGTGGGGGCTCCTACAAAACC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU91947 lncRNA upstream 63913 36194050 ~ 36194315 (+) True G73608
TU91836 lncRNA upstream 160280 36097280 ~ 36097948 (+) True G73525
TU91776 lncRNA upstream 515381 35740535 ~ 35742847 (+) True G73471
TU91767 lncRNA upstream 574070 35674973 ~ 35684158 (+) True G73463
TU91765 lncRNA upstream 586178 35671778 ~ 35672050 (+) True G73462
TU91960 lncRNA downstream 46116 36304584 ~ 36349056 (+) False G73619
TU91961 lncRNA downstream 46116 36304584 ~ 36349056 (+) True G73619
TU91986 lncRNA downstream 218140 36476608 ~ 36477950 (+) True G73638
TU91990 lncRNA downstream 231715 36490183 ~ 36500130 (+) True G73641
TU92048 lncRNA downstream 396487 36654955 ~ 36689065 (+) True G73689
AMCG00014837 mRNA upstream 706421 35551157 ~ 35551807 (+) True AMCG00014837
AMCG00014834 mRNA upstream 783859 35464001 ~ 35474369 (+) True AMCG00014834
AMCG00014836 mRNA upstream 846156 35394310 ~ 35412072 (+) False AMCG00014836
AMCG00014835 mRNA upstream 875325 35370984 ~ 35382903 (+) True AMCG00014835
AMCG00014833 mRNA upstream 937246 35027857 ~ 35320982 (+) True AMCG00014833
AMCG00014848 mRNA downstream 37248 36295716 ~ 36297723 (+) True AMCG00014848
AMCG00014850 mRNA downstream 359197 36617665 ~ 36733253 (+) True AMCG00014850
AMCG00014852 mRNA downstream 654932 36913400 ~ 36914503 (+) True AMCG00014852
AMCG00014853 mRNA downstream 742162 37000630 ~ 37030062 (+) True AMCG00014853
AMCG00014862 mRNA downstream 1438192 37696660 ~ 37706352 (+) True AMCG00014862
TU91690 other upstream 863579 35390634 ~ 35394649 (+) False AMCG00014836
TU91622 other upstream 1297781 34942011 ~ 34960447 (+) True G73343
TU91608 other upstream 1477638 34780122 ~ 34780590 (+) True G73329
TU91569 other upstream 2018828 34238934 ~ 34239400 (+) True G73292
TU91511 other upstream 2892128 33364755 ~ 33366100 (+) True G73244
TU92227 other downstream 1259640 37518108 ~ 37518406 (+) True G73850
TU92541 other downstream 2173906 38432374 ~ 38432861 (+) True G74114
TU92678 other downstream 2552225 38810693 ~ 38811128 (+) True G74227
TU92814 other downstream 3077800 39336268 ~ 39475819 (+) True G74348
TU92948 other downstream 3348419 39606887 ~ 39621186 (+) True AMCG00014913

Expression Profile