RNA id: TU91961



Basic Information


Item Value
RNA id TU91961
length 524
lncRNA type inter_gene
GC content 0.45
exon number 2
gene id G73619
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 36304584 ~ 36349056 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


gtagtgtgttaccaattgttttcttggtgactatggtcccagctgccttgagatcattaacaagatcctcccgtgtagttctgggctgattcctcaccgttctcatgatcattgaaactccacgaggtgagatcttgcatggagccccagaccgagggagactgacagttattttgtgtttcttccatttgcgaataatcgcaccaactttctcaccaagctgcttggcgttggtcttgtagcccattccagccttgtgtaggtctacaatcttgtccctgacatccttggacagctctttggtcttggccatggtggagagtttggaatctgattgattgattgcttctgtggacaggtgtctttcatacaggtaacgagctgagattagaagcactccctttaagagagtgctcctaatctcagctcgttacctgtataaaagacacctgggagccagaaatcttgctgattgataggggatcaaatacttatttccctcattaacatgcaagtcaatgtat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU91955 lncRNA upstream 46116 36258228 ~ 36258468 (+) True G73616
TU91947 lncRNA upstream 110269 36194050 ~ 36194315 (+) True G73608
TU91836 lncRNA upstream 206636 36097280 ~ 36097948 (+) True G73525
TU91776 lncRNA upstream 561737 35740535 ~ 35742847 (+) True G73471
TU91767 lncRNA upstream 620426 35674973 ~ 35684158 (+) True G73463
TU91986 lncRNA downstream 127552 36476608 ~ 36477950 (+) True G73638
TU91990 lncRNA downstream 141127 36490183 ~ 36500130 (+) True G73641
TU92048 lncRNA downstream 305899 36654955 ~ 36689065 (+) True G73689
TU92102 lncRNA downstream 423429 36772485 ~ 36772741 (+) True G73739
TU92111 lncRNA downstream 489773 36838829 ~ 36941821 (+) True G73748
AMCG00014848 mRNA upstream 6861 36295716 ~ 36297723 (+) True AMCG00014848
AMCG00014837 mRNA upstream 752777 35551157 ~ 35551807 (+) True AMCG00014837
AMCG00014834 mRNA upstream 830215 35464001 ~ 35474369 (+) True AMCG00014834
AMCG00014836 mRNA upstream 892512 35394310 ~ 35412072 (+) False AMCG00014836
AMCG00014835 mRNA upstream 921681 35370984 ~ 35382903 (+) True AMCG00014835
AMCG00014850 mRNA downstream 268609 36617665 ~ 36733253 (+) True AMCG00014850
AMCG00014852 mRNA downstream 564344 36913400 ~ 36914503 (+) True AMCG00014852
AMCG00014853 mRNA downstream 651574 37000630 ~ 37030062 (+) True AMCG00014853
AMCG00014862 mRNA downstream 1347604 37696660 ~ 37706352 (+) True AMCG00014862
AMCG00014864 mRNA downstream 1404739 37753795 ~ 37754523 (+) True AMCG00014864
TU91690 other upstream 909935 35390634 ~ 35394649 (+) False AMCG00014836
TU91622 other upstream 1344137 34942011 ~ 34960447 (+) True G73343
TU91608 other upstream 1523994 34780122 ~ 34780590 (+) True G73329
TU91569 other upstream 2065184 34238934 ~ 34239400 (+) True G73292
TU91511 other upstream 2938484 33364755 ~ 33366100 (+) True G73244
TU92227 other downstream 1169052 37518108 ~ 37518406 (+) True G73850
TU92541 other downstream 2083318 38432374 ~ 38432861 (+) True G74114
TU92678 other downstream 2461637 38810693 ~ 38811128 (+) True G74227
TU92814 other downstream 2987212 39336268 ~ 39475819 (+) True G74348
TU92948 other downstream 3257831 39606887 ~ 39621186 (+) True AMCG00014913

Expression Profile