RNA id: TU91986



Basic Information


Item Value
RNA id TU91986
length 315
lncRNA type inter_gene
GC content 0.37
exon number 2
gene id G73638
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 36476608 ~ 36477950 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ctgtaattgagtagcttttttgTGTACTTGTACTTTCTTTAGTCttagacagacagggaggagatcagctacattatgtcggaagatataatctcaagtgccatgtgggatcacaaagaaattagttttattagcagcatggagtgaaaaccacgtacagaaacaatgactgcttactgttaatatccgagtgtattaaaaacttgccgaACACTGGTTTCAGAGGACCctggtgcagtgccgtgactagttaaaaataaactgaaggataataatcggattggtagcagccaattttattaacattttatgaac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU91960 lncRNA upstream 127552 36304584 ~ 36349056 (+) False G73619
TU91961 lncRNA upstream 127552 36304584 ~ 36349056 (+) True G73619
TU91955 lncRNA upstream 218140 36258228 ~ 36258468 (+) True G73616
TU91947 lncRNA upstream 282293 36194050 ~ 36194315 (+) True G73608
TU91836 lncRNA upstream 378660 36097280 ~ 36097948 (+) True G73525
TU91990 lncRNA downstream 12233 36490183 ~ 36500130 (+) True G73641
TU92048 lncRNA downstream 177005 36654955 ~ 36689065 (+) True G73689
TU92102 lncRNA downstream 294535 36772485 ~ 36772741 (+) True G73739
TU92111 lncRNA downstream 360879 36838829 ~ 36941821 (+) True G73748
TU92162 lncRNA downstream 683038 37160988 ~ 37163326 (+) True G73791
AMCG00014848 mRNA upstream 178885 36295716 ~ 36297723 (+) True AMCG00014848
AMCG00014837 mRNA upstream 924801 35551157 ~ 35551807 (+) True AMCG00014837
AMCG00014834 mRNA upstream 1002239 35464001 ~ 35474369 (+) True AMCG00014834
AMCG00014836 mRNA upstream 1064536 35394310 ~ 35412072 (+) False AMCG00014836
AMCG00014835 mRNA upstream 1093705 35370984 ~ 35382903 (+) True AMCG00014835
AMCG00014850 mRNA downstream 139715 36617665 ~ 36733253 (+) True AMCG00014850
AMCG00014852 mRNA downstream 435450 36913400 ~ 36914503 (+) True AMCG00014852
AMCG00014853 mRNA downstream 522680 37000630 ~ 37030062 (+) True AMCG00014853
AMCG00014862 mRNA downstream 1218710 37696660 ~ 37706352 (+) True AMCG00014862
AMCG00014864 mRNA downstream 1275845 37753795 ~ 37754523 (+) True AMCG00014864
TU91690 other upstream 1081959 35390634 ~ 35394649 (+) False AMCG00014836
TU91622 other upstream 1516161 34942011 ~ 34960447 (+) True G73343
TU91608 other upstream 1696018 34780122 ~ 34780590 (+) True G73329
TU91569 other upstream 2237208 34238934 ~ 34239400 (+) True G73292
TU91511 other upstream 3110508 33364755 ~ 33366100 (+) True G73244
TU92227 other downstream 1040158 37518108 ~ 37518406 (+) True G73850
TU92541 other downstream 1954424 38432374 ~ 38432861 (+) True G74114
TU92678 other downstream 2332743 38810693 ~ 38811128 (+) True G74227
TU92814 other downstream 2858318 39336268 ~ 39475819 (+) True G74348
TU92948 other downstream 3128937 39606887 ~ 39621186 (+) True AMCG00014913

Expression Profile