RNA id: TU92204



Basic Information


Item Value
RNA id TU92204
length 452
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G73828
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 37297677 ~ 37298128 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ctcttgatatttttttgcatacctctattaaaccattttggccaatgttttttggtcctcaatttgctaagttttggtacaaatttctcctgagcctcaagtagtatattcttaaaatataacaatccattttcaactgaatctgtatccagtgtgctccagtctacctcttctaagtgccgcctcataccttcaaggtttgcttttctgaaattgtagaccattgttttagacttgggccttgttttttgaaagaatgcctaaaagctaaccatgttgtgatcacaatttgccattggttctctaactagtgtccctctgactctatcttggtcatttgaaaatatcaagtcaatgcatgcactctccctggttggttccctgacaaattgagttagaaagcagtcatttaccatctcaaccatttctatttctgcttctgtagtcccaac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92181 lncRNA upstream 54231 37243235 ~ 37243446 (+) True G73806
TU92177 lncRNA upstream 124501 37172931 ~ 37173176 (+) True G73802
TU92162 lncRNA upstream 134351 37160988 ~ 37163326 (+) True G73791
TU92111 lncRNA upstream 355856 36838829 ~ 36941821 (+) True G73748
TU92102 lncRNA upstream 524936 36772485 ~ 36772741 (+) True G73739
TU92205 lncRNA downstream 1257 37299385 ~ 37299598 (+) True G73829
TU92208 lncRNA downstream 26894 37325022 ~ 37325324 (+) True G73832
TU92214 lncRNA downstream 78147 37376275 ~ 37376615 (+) True G73838
TU92225 lncRNA downstream 213708 37511836 ~ 37512309 (+) True G73848
TU92229 lncRNA downstream 233488 37531616 ~ 37532213 (+) True G73852
AMCG00014853 mRNA upstream 267615 37000630 ~ 37030062 (+) True AMCG00014853
AMCG00014852 mRNA upstream 383174 36913400 ~ 36914503 (+) True AMCG00014852
AMCG00014850 mRNA upstream 564424 36617665 ~ 36733253 (+) True AMCG00014850
AMCG00014848 mRNA upstream 999954 36295716 ~ 36297723 (+) True AMCG00014848
AMCG00014837 mRNA upstream 1745870 35551157 ~ 35551807 (+) True AMCG00014837
AMCG00014862 mRNA downstream 398532 37696660 ~ 37706352 (+) True AMCG00014862
AMCG00014864 mRNA downstream 455667 37753795 ~ 37754523 (+) True AMCG00014864
AMCG00014863 mRNA downstream 456731 37754859 ~ 37755848 (+) True AMCG00014863
AMCG00014870 mRNA downstream 603669 37901797 ~ 37904976 (+) True AMCG00014870
AMCG00014867 mRNA downstream 637463 37935591 ~ 37944752 (+) True AMCG00014867
TU91690 other upstream 1903028 35390634 ~ 35394649 (+) False AMCG00014836
TU91622 other upstream 2337230 34942011 ~ 34960447 (+) True G73343
TU91608 other upstream 2517087 34780122 ~ 34780590 (+) True G73329
TU91569 other upstream 3058277 34238934 ~ 34239400 (+) True G73292
TU91511 other upstream 3931577 33364755 ~ 33366100 (+) True G73244
TU92227 other downstream 219980 37518108 ~ 37518406 (+) True G73850
TU92541 other downstream 1134246 38432374 ~ 38432861 (+) True G74114
TU92678 other downstream 1512565 38810693 ~ 38811128 (+) True G74227
TU92814 other downstream 2038140 39336268 ~ 39475819 (+) True G74348
TU92948 other downstream 2308759 39606887 ~ 39621186 (+) True AMCG00014913

Expression Profile